Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366535
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Entry
139366535 CDS
T10872
Name
(RefSeq) septin-8-A-like isoform X1
KO
K16939
septin 6/8/11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139366535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139366535
04812 Cytoskeleton proteins [BR:
ocla04812
]
139366535
04147 Exosome [BR:
ocla04147
]
139366535
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Sperm associated proteins
139366535
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
139366535
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139366535
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Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
AAA_16
RsgA_GTPase
Roc
AAA_22
ABC_tran
DUF87
ATG14
Ras
AIG1
RNA_helicase
AAA_7
RHD3_GTPase
DUF5906
AAA_29
DUF8104
DUF4478
TPR_MLP1_2
CLP1_P
Motif
Other DBs
NCBI-GeneID:
139366535
NCBI-ProteinID:
XP_070960245
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All DBs
Position
14:33511085..33540485
Genome browser
AA seq
441 aa
AA seq
DB search
MAATDIDIFANEEERCLELGGHVGFDSLPDQLVSKSVTQGFCFNILCVGETGIGKSTLMN
TLFNTLFEAEEASHYQNGVCLRPRTYDLKESNVQLKLTVVDTVGFGDQINKEESFKPIVD
YIDTQFETYLQEEMKIKRSLFDYHDTRIHICLYFIAPTGHSLKSLDLVTMKKLDSKVNII
PIIAKADTISKSELHKFKIKIMSELVSNGVQIHQFPTEDEAVTEINSSMNAHLPFAVVGS
VEEVEVGNKMVKARLYPWGTVQVENESHCDFVKLREMLLRVNMEDLREQTHARHYELYRR
CKLEEMGFTDTDPDNKPFSLQETYEAKRKEFLGDLQHNEDDMRQMFVNKVKETEAELKIK
ERELHERFEQLKRMHQEEKRNLEEKRSDLEEDMNDFNRRKVAAETLMGQSLQGSSQPFRK
DKKNFFSLPSACSLTSGRNLN
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacggacatagacattttcgctaatgaagaggagcgttgcctggagctgggt
ggccatgttgggtttgacagtcttccagaccagttggtcagtaaatcagtcacacaggga
ttctgcttcaacatcctgtgtgtcggtgagacagggatagggaagtcaacgttgatgaac
acgctgttcaacacactgtttgaggccgaggaggccagccactaccagaacggtgtgtgc
ctgcggcccaggacctacgacctgaaggagagcaacgttcagctcaaactgaccgtagtc
gacaccgtggggttcggagaccagatcaacaaggaggagagcttcaaacccatagtggac
tacatcgacactcagtttgagacctacctgcaggaggagatgaagatcaaacgttccctg
ttcgactaccacgacaccaggatccatatctgtctctacttcatcgccccaaccggacac
tctctcaaatcactggatctggtcaccatgaagaaactggacagcaaggtaaacatcatc
cccatcattgccaaggcagacaccatatctaagagcgagctgcacaagttcaagatcaag
atcatgtcagagttggtgagcaacggtgttcagatacaccagttccctactgaggacgag
gctgtcaccgagatcaactcctccatgaatgcccatctgccctttgctgtggtggggagt
gttgaggaggttgaagtggggaataagatggtgaaagccagactgtacccctggggaact
gtacaggtggagaacgagagccactgtgactttgtgaagctgagagagatgttgctgaga
gtgaacatggaagacctgagagagcagactcacgccagacactacgagctctacagacgc
tgcaaactggaggagatgggatttacagatacagaccccgacaacaaaccctttagtctg
caggagacgtatgaggccaagaggaaagagttcctgggggacctgcagcataacgaggat
gacatgagacagatgtttgtcaacaaggtgaaggagaccgaggcagagctgaaaataaag
gagagggagctccatgagaggtttgagcagctgaagaggatgcatcaggaggagaagagg
aatctggaggagaagaggagcgatctggaggaggatatgaacgacttcaacaggaggaag
gtggcagctgagacgctgatgggtcagtctctacagggatcctcacaaccattcagaaag
gacaagaagaacttctttagtcttccgtctgcgtgctccctaacatcaggaaggaattta
aattag
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