Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366569
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Entry
139366569 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139366569
04120 Ubiquitin mediated proteolysis
139366569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139366569
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139366569
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139366569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
FAR1_N
zf-RING_Vps41
FANCL_C
Motif
Other DBs
NCBI-GeneID:
139366569
NCBI-ProteinID:
XP_070960319
LinkDB
All DBs
Position
14:35085838..35098510
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AA seq
630 aa
AA seq
DB search
MVRAGLVTATSLALTGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMVLLGILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVHLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNPNQPPTPAPAQPPAPAAPANAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAPGAPGATDAPGATEAAQTQGAGTS
HSTGASTVGAAPAPGGPMPGFPFPSFPPPPFPSAPWLTMPPPPPFVSSMPPPPPALSTMS
EAELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLTTVATLTPPQSETSSAAGEA
SGSSPPSTSAETQENQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDKRDEEEGDGE
EVGEDGEPNPSELRRRRLRKLETTPPPPDH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcaggcctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctactttctcaaacaccagttctaccccactgtggtctacctcactaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctattgggaaagttc
atgcgtaaaatcttcttcggacagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttaccgtgtttagagatgacttctct
ccccgcttcgttgccctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggttgactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctcatggtgttgctgggaatcctggacttcctgtttgttaaccatgcctgt
cacagtatcatcacccgaggggcctctgtccaactagtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgttcacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggctatgaggcagttcaagaaagcagtaacg
gatgccataatgtcccggcgagctatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagagatggtgact
ggagccaagaaacttccctgcaaccatatcttccactctagttgccttcgttcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaac
cagcctcccaccccagcgcctgcccagcctcctgccccggcagcacccgccaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctggggccccttccctggagcggctccccctgctggtgctcccggtgcccca
ggggccacagacgcccctggggccacagaggcagctcagactcagggcgctggtaccagt
cattccacaggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctggg
ttccccttcccctccttcccacccccaccgttcccctcagctccatggctgactatgcca
ccacctccaccgtttgtgtcatccatgccccctcctcccccggccctgtccaccatgtca
gaggctgagctgagggagctggagcaggagggccgtagaggcctggaggccagactgcag
tgtctccacaacatccacactctactggacgctgccatgctcaacatccaccactacctc
actaccgtcgccacgctcactcctcctcagtcagaaaccagcagcgctgccggcgaggcc
agcggatcatctcctccctccactagtgcagaaacccaggagaaccaggagaatgactct
cagagcagtacagccgctgaacctgaagctgtgaacggggccacaggtttctcccagcca
gactctaccacgttgggcgacagtgaagacaagcgggatgaagaggaaggagatggagag
gaagtcggcgaagacggagagcccaacccttcagagctgaggcgccgtcgtctccgcaaa
ctcgagaccacacccccccctcctgaccactga
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