Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366585
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Entry
139366585 CDS
T10872
Name
(RefSeq) catenin alpha-1-like isoform X1
KO
K05691
catenin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
ocla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139366585
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139366585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139366585
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139366585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Motif
Other DBs
NCBI-GeneID:
139366585
NCBI-ProteinID:
XP_070960359
LinkDB
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Position
14:complement(37510247..37729876)
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AA seq
917 aa
AA seq
DB search
MTAINTANINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LAASVETATLNFLDKGEKIAKESQFLKDELTAAVEDVRKQGESMKQASGEFAEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMSDVYKLLLQLKLVEENLMKVRNAGTEQDLGIQYKAL
KPEVDKLNMMAAKRQQELKDVHHKDRMAAARGVLQRNIPMLYTASRACLQHPDLAAYKAN
RDLIYKQLQHAVSGISNAAQATASDEAAFNHPAGGGELAYALNNFDKQIIVDPLAFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNAGKKDK
SDALNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHANKLIEVANLACSICNNEEGVKLVRMAASQLETLCPQVINAALALAAKPNSKVA
QDNMDLFKDSWEKQVRVLTDAVDDITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTCEMDNYEPGVYTEKVLEATKLLTNTVMPRFTEQVEAAVEALSA
NPTLPVDENEFIDASRLVYDGVRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTED
DQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADQCPDSACKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGELVVSGEVSQAFLESQVDSAMSLIQAAKNLMNTVV
STVKASYVASTKYQKSMAMQSLNMPAISWKMKAPEKKPLVKREKQEDGSNNKVKRSSQKK
HINPVQALSEFKAMDSI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacagccataaacacggccaacataaacttcaaatgggatccaaagagcctggagatc
cgtaccctggctgtggagcggctgctggagcccttggtcacacaggtcacgaccctggtg
aactccagcaacaagggtccgtccaataagaagaagggtcgatctaagaaggcccatgta
ttggctgcctcggtggaaaccgctaccttgaacttcctggataaaggagagaagatcgcc
aaggagagccagttcctcaaggacgagctcactgctgccgtggaggatgtacgcaagcaa
ggtgaatccatgaagcaggcatcaggagagtttgcagaggacccctgttcctcggtaaag
aggggtaacatggtccgtgcagccagggcactcctctccgccgtcactcacctgctggtg
ctggccgacatgtctgatgtctacaagctgctgctgcaactcaaactggtggaggagaac
ctgatgaaggtgcgtaacgctggaacagagcaggacctgggcatacagtacaaggccctg
aaaccagaggtggacaaactcaacatgatggctgccaagagacagcaggagttgaaggat
gttcaccataaggatcggatggcggctgcccgcggtgttctccagaggaacatccccatg
ctctacaccgcctcccgcgcctgccttcaacaccctgacctggccgcatacaaggcgaac
cgtgatctgatctacaagcagcttcagcatgctgtctcaggcatctccaatgctgcccag
gctaccgcctcggatgaggctgccttcaaccaccctgccgggggaggagagctggcctac
gctctcaacaactttgataagcagatcatcgtggaccccctggcgtttagcgaggagcgt
ttccgcccgtctctggaggagcgcttggagagcatcatcagtggcgccgccctcatggcc
gactcgtcctgtacccgtgacgaccggcgcgagcgcatcgtggccgagtgcaactctgtc
cgtcaggctctgcaggacctgctgtccgagtacatgggcaatgctggcaagaaggacaag
agtgatgctctgaacactgccatcgacaggatgaccaagaagactagggaccttcgcaga
cagctgcgtaaggcggtcatggatcacgtctctgactcgttcctggagaccaacgttccc
ctgctggttctgatcgaagcggcgaagaacgggaacgagaaggaggtgaaggaatacgcc
caggtgttccgcgagcacgccaacaagctcatcgaggtggccaacctggcctgctccatc
tgtaataatgaggagggagtcaagctggtccgtatggccgcttcccagctggagacactc
tgcccccaggtgattaacgcggctctggctctagctgccaagcccaacagtaaggttgcc
caggacaacatggacctcttcaaagactcctgggagaaacaggtccgcgtcctcactgac
gccgtcgatgacatcaccagcatcgacgacttcctctgtgtgtccgagaaccacattctg
gaggacgtgaacaagtgtgtgatagcgctgcaggagaaggatgtggacgggttggaccgc
acggccggtgccatccgtggccgcgccgccagagtggtccatgtggtcacgtgtgagatg
gacaactatgaacctggagtctacacagagaaggttctggaggccaccaagctactcacc
aacacagtcatgcccaggttcacagagcaggtggaggcagcggtcgaggctctcagtgcc
aaccccacgctccccgttgacgagaacgagttcatcgatgcctcccgcctggtctacgat
ggcgtccgcgacatccgcaaggccgtgctgatgatccggactcctgaagagctggatgac
tctgactttgagacggaggactttgatgttcgcagcaggaccagcgttcaaacagaagat
gaccagcttatcgcaggccagagcgccagggctatcatggcccagctgccccaggagcag
aaggctaagatcgctgagcaggtggccagtttccaggaggagaagagcaagctggacgct
gaggtgtccaagtgggacgactccggcaacgacatcatcgtcctggccaaacagatgtgt
atgatcatgatggagatgacggacttcaccaggggtaaaggaccgttgaagaatacctct
gatgtcatcagtgctgctaagaagattgctgaggctggatccaggatggataaactgggc
cggaccatcgcagaccagtgtccagactcggcctgtaagcaggacctgttggcctacctg
cagcgtattgctctgtactgccaccagctcaacatctgtagtaaggtgaaagcagaggtc
cagaacctgggaggagagctcgtggtctctggggaggtttcccaagcattcctagagagc
caggtggacagtgccatgtctctgatccaggcagctaagaacctgatgaatacggtggtg
tccacggtcaaggcgagctacgtggcctccactaagtaccagaagtccatggccatgcag
tccctcaacatgcctgctatctcctggaagatgaaggccccagagaagaaacccctggtc
aagagagagaaacaggaagatggatccaacaacaaggtcaagaggtcatcccaaaagaag
cacatcaaccctgtccaggccctcagcgagttcaaagccatggatagcatctag
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