Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366598
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Entry
139366598 CDS
T10872
Name
(RefSeq) transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139366598
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
139366598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
139366598
NCBI-ProteinID:
XP_070960382
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All DBs
Position
14:complement(40296087..40312405)
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AA seq
630 aa
AA seq
DB search
MVEKERKKGKKQMEVPDPEERTEERTKRKSNTLHTQRVGDDGGTVAAGGMSSWKKKKTRN
DRETEEGMDSGLSASAVDVSAVRVPVEAIKSKKKLKNRQTKLEEGAESRETVLRLADDPE
IIELYTEAVEGGENVVTEVQKNEKENRKRKKEKVGEIQLSVCPDETELPGILEQTGRKWK
TTTRMKTQPDGGAEEGSRRNKRQCCRESDTGMDSVPSKSDNRTRDAGPESETGQDGLHTT
MVETSTQHRRRMQNDKALSENEWRAMIELKEFVPNIASRPVNKIRAMIKYDLDRFKEFRR
QGISLRTGRYSAQENRQLMSNINDFLALTGIENAAKLFHTKRFRDELSFIQRLKSHHRFP
ERIGEGIPRPWHKIYTRGGRKMFDGSSYKGRRRFSEDELYSLKKLQTLHGNNWVKISQLT
GRSETPLRKRFSQIFANLGSWGEEELKRLMEAVRDHLLGQVEPGRGHATVRKDQLYNNIP
WTVVCRRVKTRHRDQCRMKWLGVMAYKMAHGQPAFSGGVKTLKAKVDLIKALNAMQVEDA
SDVDWEEIAHTIGGVTPCYVQMHYHKLKVAKVPLRQSMSFCETIDFLYSSVLPKFEELLR
HSQTESGETESREDPQEHFLLSEIFEDEDD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaaagagaggaagaaaggtaagaagcaaatggaggtaccagatcctgaggaa
cgaactgaagagagaactaagagaaagtcaaacactcttcacacacaacgtgtgggagac
gatggagggactgttgccgcgggggggatgagtagctggaagaaaaagaaaacccgtaat
gacagagagacagaagaggggatggacagtggcctctcagcgtctgcagtagatgtctca
gctgtaagggtgcccgtagaggccataaagagtaagaagaagctcaagaacagacaaact
aagcttgaagagggagcggaaagccgtgagacagttttaagattagcagatgatcctgaa
atcatagaactgtacactgaagcggttgagggaggggaaaatgtggtaacggaggtacag
aagaacgaaaaagagaacaggaaacgaaagaaggaaaaagttggagagattcaactgagc
gtttgtccagatgaaaccgagctcccaggtattctagaacaaactgggagaaaatggaaa
acaacaacgaggatgaaaacacaaccggatggaggggctgaagagggcagcaggagaaac
aagagacaatgctgcagagagtccgacacgggaatggacagtgtcccctctaagtcagat
aacaggactcgtgatgctggaccagaatctgagacagggcaagatggcctccatacaacc
atggttgagacaagcacccaacaccgcagacgcatgcaaaacgataaagctctaagtgaa
aacgaatggagggctatgattgagctcaaagagtttgttcccaatattgcgtcgcggcct
gttaataagatcagagcgatgatcaagtatgatcttgatcgattcaaggaattccgaaga
caaggcatttccctgcgaaccggacgatacagcgcacaggagaacagacaactcatgagt
aacataaacgacttcctggctctcacagggattgagaatgccgctaaactcttccataca
aagcgcttcagagacgaactgtctttcatccagaggctgaagagtcatcacagattccct
gagagaataggtgaaggaatcccgaggccttggcataagatctatactcgtggtgggagg
aaaatgtttgatggcagcagttacaagggccgacgaaggttcagcgaagatgaactttac
tctttgaaaaaactgcagacgttgcacggcaacaattgggtgaagatctcacagttgact
ggccggagtgaaacgccccttaggaaacggttttctcagattttcgcaaacttaggttct
tggggcgaggaagaactgaagagactaatggaagctgtgcgagaccacctgctgggacag
gtggagcctggcagagggcatgccaccgtcaggaaagaccagctgtacaacaacatcccc
tggacagttgtatgccggagggttaagacacgccaccgggaccagtgtcgaatgaaatgg
ttgggtgttatggcatacaaaatggcacacggacaaccagcattcagtggaggtgtgaaa
accttaaaggctaaagtggatttgatcaaagcgttgaatgcaatgcaggtggaagatgcc
tcagatgttgactgggaagaaattgctcacacaattgggggagttactccttgctacgta
cagatgcactaccacaagctaaaagtagccaaagtgccgttgcgtcagagcatgtctttc
tgtgagaccattgatttcctgtacagtagtgttctgcccaagtttgaagagctcctccga
cacagtcagactgagtcaggggagaccgagtccagagaagatccacaagagcacttcctg
ctctcagagatctttgaagatgaggacgactga
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