Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366601
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Entry
139366601 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139366601
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139366601
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139366601
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
139366601
NCBI-ProteinID:
XP_070960385
LinkDB
All DBs
Position
14:40952393..40960621
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AA seq
763 aa
AA seq
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MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELFSRLQQIKDGPEQQQPSINTSETGEATGEPTEPAEGPEDPSNGDTLLDWLNTVRRT
GNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARADVETGEAQEEGPAE
APGDGVEAVVGVEVQAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEA
GTEAGTEAGTEAGTGAGTGAGTGAPMETGEVLEEPVVEEMAVIVEPEAEMEPEAEVEAEM
VPELVVEVVPQPPSPVTATPPVSRPASPLVQATPAPAPPSPPPEEPPRRGQRRARSRSPE
QRRTRARTTRSRSPLTLDRLDGLPRHVPNATPSHSPPTLPPQAPAEGSSRTRQHVLSRQS
TAEYDVQSAGTGSGNAPEPVTTPPQEGEAAGAEGAAGRRPPTIMLDLQVRRVRPGEYRQR
DSIANRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGE
ATSMALQTMIRQIMTGFGELSYFMDSDSDSSDSNRGGGNPTGAADLAEALNTPDGGVAGM
AEGAELPVSVGGPSVGGAGEARTEEGEEGVGVGLAPGIGLGVGGTPREGRGRPRAPISLE
EPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAEGN
KLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttcagtcggttgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaaccgacagaaccggcggaaggt
ccagaggacccgtctaatggcgacaccctcttggattggctgaacactgtcaggcggaca
ggcaacaccacccgcagtggtcacagaggcaaccagtcatggcgggcagtgagccggacc
aacccaaacagcggagacttccggttcagtctggagatcaacgttaaccgtaacctggcc
gagcagcaggcccgcgccgatgtggagacgggggaggctcaagaggaaggcccagcagaa
gcacctggcgatggggtggaggcagtggtcggagtggaggtccaggcagggactgaggca
gggactgaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggca
gggactgaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggca
gggactgaggcagggactgaggcagggactgaggcagggactggggcagggactggggca
gggactggggcgcccatggagacaggagaagtgctcgaggaaccagttgtggaggagatg
gctgtcatagtggaaccagaagcggagatggagccagaggctgaagtagaagcagagatg
gtcccagaattagtagtagaggtagtcccacagccgcccagccctgtcaccgccacccct
cctgtctccagaccagccagtcccctggtgcaggccaccccggcccccgccccccccagc
ccgccccctgaggagcctccccgacggggccagagacgagcccgcagccgtagccctgag
cagcgccggaccagggctcgcaccacacggagccgttcccctctcaccctggaccgactg
gatggcctcccccgccacgtgcccaacgccaccccttcacacagcccccccaccctgccc
ccccaggcccccgcagagggaagctcacggactcgacagcatgttctgtcccggcaaagc
actgcagagtacgatgtccagtcagccggaacagggtctgggaacgccccagagcccgtt
accaccccaccccaggagggagaggccgcgggcgcggagggagcagcaggacgacgtccc
cccactatcatgctggacctgcaggtgcgccgtgttcgtccaggtgagtaccgccagagg
gacagcattgctaacagaacccgctcacgctcccagaactccaacaacaccttcctgtac
gagagtgagaggggggggttccgcaggaccttctcccggtccgagcgtgcgggtgtgagg
acgtacgtcagcaccatcaggatccccatcaggaggatcagtgatgcagggttgggagag
gccacctccatggctctgcagaccatgatacgacagatcatgaccggcttcggagagctc
agctatttcatggactcagactctgactcctcggactcaaaccgtggcggtggtaacccc
actggcgctgccgacctagcagaggcgctcaacactcccgacgggggagtagctggtatg
gcggagggggcggagcttcctgtctcagtgggtgggcctagtgtgggaggagccggggag
gcaaggacagaggagggggaagagggggttggtgtaggtctggccccagggataggttta
ggggtggggggcacccccagggaggggcgaggtcgcccccgtgcccccatcagtctggag
gaaccagggtcactaccctttctccgccttgctcacttcttcctcctgaatgatgaggat
gaggaacagcccagaggactcaccaaggagcagatcgacaacctctccaccaggaacttt
ggggagagtgatgctctgaagacctgcagtgtgtgtatcacagagtatgctgaggggaac
aagttgaggaagttgccctgttctcatgagtaccatgttcactgtatcgaccgctggctg
tctgagaactccacctgtcctatctgccgcagggccgtgttggtgtctgctaaccgggag
agtgtggtctaa
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