Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366766
Help
Entry
139366766 CDS
T10872
Name
(RefSeq) POU domain, class 6, transcription factor 2-like
KO
K09368
POU domain transcription factor, class 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
139366766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139366766
NCBI-ProteinID:
XP_070960570
LinkDB
All DBs
Position
15:complement(29180016..29263677)
Genome browser
AA seq
671 aa
AA seq
DB search
MITGQLSKPLLSLRSEMSVAELRAEDKAATPDSELNDESLLLSSEARDREDIPNKLYGAR
DGSVQSDTSSSPSEQSQLGQCHPAYPVGPQSLLVAQQLAQQLAGGSPGLNQPILIPFNTG
GHLGGQQGLVLSLPTANIQGLMAAAAAQGIMTLPLQNLQATSSLNSQLQHLQQLQQIQQH
HQQQQQHHHQQQQHHQQHQHSHSHVHNQLSSRGHMTSPSLQLSSVSVPSPGSASSTTSMT
GSGQPPLSPPLRQNQSPARSLPSPVTPPMPLQLNPLASQAAVAAAAAAMGSMAGSQVFGN
TLSNLQAGVTGQLVTNAQGQIIGTIPLMPNSGGPSSQSGGVNPALQVQPITPQLLTNAQG
QIIATVIGNQILPVINTQGITLSPIKPGQQLPQAQHVQTGPLSSQPNLLHMPHSQSPLRQ
ASSSSSSSSSSSALSVGQLVSNPQTAASEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVG
QALSAAEGPAYSQSAICRHTILRSHFFLPQEAQENPIGSSLTGKLNPGLLYPARFEKLDI
TPKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHF
EKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPGDLDLDLGPTAPMD
PLSDSLEELPK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggcagctgagcaagccgctgctctccctgcgcagcgagatgagcgtggcg
gaactccgggccgaggacaaagcggccaccccagatagcgagctcaacgacgagtccctg
ctcctgtcctccgaggccagggacagagaggacattcccaacaagctctatggagcccgt
gatggctctgtccagtctgataccagcagcagcccgtcagaacagagtcagctgggacag
tgtcacccagcctacccggtgggtccacagtctctgctggtggctcagcaactagcccag
cagctggccggggggtctccaggcctgaaccagcccatcctcatccccttcaatacaggc
ggccacctgggaggccagcaggggctggtgctctcgctgcccacggccaacatccagggc
ctgatggctgcagcagccgcacagggcatcatgacccttcccctacagaacctgcaagct
acctcatccctgaactcccagcttcagcacctgcagcagcttcaacagatacaacagcac
caccagcagcaacaacagcaccatcaccaacaacagcaacaccatcagcagcatcagcac
tcccacagccacgtccacaaccagctgtcgtcgcggggtcacatgacctcgcccagccta
cagctgtcctccgtctcggtcccctcccctggctccgcctcctccaccacctccatgacc
ggctcgggccaacccccgctgtctccgccgctcaggcagaaccaatcaccggcccgaagc
ctgccctcgcccgtcacaccgcccatgccactgcagttgaaccctctggccagccaggct
gcggtggcggcagcagcagcagctatgggctctatggccggatcccaggtctttggcaac
accctctccaacctgcaagctggagtcacggggcaactggtcactaatgcacaaggacag
ataattggaacgatcccacttatgcccaactctggggggccctcgagccaatcagggggc
gtaaacccagcgctgcaggtccagccaattacaccccagcttctgaccaacgcccagggc
cagatcatcgccacggtgatcggcaatcaaatcctgcctgtcatcaacacccagggaatc
acactgtcaccaatcaagcctggacagcagctgcctcaggctcagcatgttcagacaggc
ccattgtcgtctcagcccaacctgctccacatgccccacagccagagtcctctccgccag
gcctcttcctcctcctcgtcctcatcttcctcttctgccctcagcgtgggtcagctggtc
agcaacccccagacggccgccagcgaagtggatggggtcaacctggaggagattcgggag
ttcgccaaagcgttcaaaatccgccgcttgtccctggggctgacccagacgcaggtgggt
caggcactcagcgcggccgagggcccggcctatagtcagtctgccatctgcagacacacc
atcctgagaagccactttttcctaccacaggaagcccaagaaaaccctataggtagcagt
ctgacaggcaaactgaaccctggccttttatatcctgccaggtttgagaagttggacatc
accccaaaaagcgcccagaagattaagccggttctggaacgctggatggccgaggccgag
gcccgccaccggtccggcatgcagaacctgaccgagtttatcggcagtgagccctccaaa
aaacgcaagcggaggacctctttcaccccacaagcgctggagatcctcaacagccacttt
gagaagaacacgcacccctctggacaggaaatgaccgagatagccgagaaactgaactat
gaccgcgaggtggtccgcgtctggttctgcaacaagaggcaagcgttgaaaaacacaata
aagcggttgaaacagcccggtgacctggacctggacctcggcccgaccgcgcccatggac
cctctctctgattctctggaagagctccctaaatga
DBGET
integrated database retrieval system
