Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366833
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Entry
139366833 CDS
T10872
Name
(RefSeq) uro-adherence factor A-like
KO
K19538
retinitis pigmentosa 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139366833
04812 Cytoskeleton proteins [BR:
ocla04812
]
139366833
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139366833
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
139366833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
139366833
NCBI-ProteinID:
XP_070960627
LinkDB
All DBs
Position
15:complement(29311967..29325418)
Genome browser
AA seq
2521 aa
AA seq
DB search
MSEVGPRRPPQDQSSGSGHTVTTSRHPYITDPIASKHVCFYKSGDPQFSGLRMAINSRTF
KTFDALLDSLSKKVPLPFGVRNITTPRGVHAVHTLDELEDGKAYICSDQRKVKPINMAAA
SKKLPPWYHARPMSARRRAFQLAKQNPGRPMRKKKPVTVRTPKRLMVFRNGDPSVKHNMM
LQKRTTPTFEALLDYVSELMHFPVVKLHTPDGRRVDGLPALILCSGIVVAAGREAFKSGN
YKTQRSSAPTWLPARRMASKRLKQPAPRKKKSVSSSKSHLFSSSSERYFVNQIHHSVAGS
QCDLPSNNTGSVVLEAGHFLESVAETDADTYNGHEGADNCMPGDDDIEKSFRVNQDGSMT
VEMKVRLTIKEEETIHWTTTLTRSSVASQLSVAESELEIRSPESNALPPTQPNAMGTING
YNAKKDDHDDEDDMSPEASGPTSVEGDDEDNSKIHVSEVSLRRAPTPGPRRSRQKQASLE
NINTPSGDEIQENIVGSYSYRETTKNGEVKEEYCMVRQCSSRPVPKPRRVGSMDINNYNK
TQSTFKSGAAEILQIQNSEEEVRESVMQIYEQQTCQDNFLANSQYSVQGVSTYGLMYGRP
ATSETARFSSSNDLEMELERLSTASESISVRRADQSLSSDFTIPTFKAGGSVLRNRVLNV
HKTSLSKPTKDNETPKLVSEESKENSTTKAVKKVKKRFSKPKLRKYQVRKSTTPDKRRKE
SSANSPENNKRVKTGGFSRNASIRKIYGPKPARSLMKNKLKGKEIKLNIENPKELSVKEL
NVSENGNGTSVSVKKKLLHVSFPTEAQGKGTLKRQRSVHEERRIAKECHDLSLPALLSSS
SNINEYVENWLEKALPTVYPDPVEETQNVETPTMSQVETEGDLVPDVSEINCEMDIEEDE
SCFLKEKTQIPSSPSLVTAAFPNRTFENIATQTNLTMENTTLPCPSDPSLQKTPLHIDTI
QERLPTNPSAENPPLSNGFSVFPPAIISVEKPSPSDSPSLEQTSIPIKISVEKLPIPNDL
SLENTSVPNSSLKENIPVSNCLSPEKTPLPAKTQTEKTPLPAKTQTEKTPLSNKVSDGSS
VASSPSYLMCSSPSSLGDEEQPLSSSPSSDEAPSTTGHAFEKTLFNHSTLKEPPSPKLAT
KKTRLLSNLSLEKQLSFRKAAAEKSSISSDPTVEKVLVDKAPISNGLSSDKTSHPAKTLI
SNNVLNEASLASSPSCFISTSPTNRTSDERALSISPPSEEDLSPTGHVLEKTTLFNHSTL
RETSSPKLPTKKTRLISNVSLEKQLSLRRLSVNKSSLSSNPTLEKAQLSNPVQITADKTQ
LPNSHSLEETSPPNKSSLPSDSTSENTQLSSSPQQGRTPLPRHISLKTQLHNNFSPERTN
LPTLMTRNKSAPSNLSSEKIPVPSNRTLKNRLSPYSQTLEIVSPPTRLKAKKKPVSRNHS
LAIEPSPVSPTLKRTPLPRKSRQTPLSPKSTPVHLNSSMKKTPTPPSPALVNHEETNGDD
NLSNSDQGDSTKVTAEEPLTKAQIPSYREQLPPQPDMKPVLEKLCFSIRSIRQITHNNRP
SCLEKSNSLPDFSSHVASTFGSSSKALLAFLSVITLKESFTNWNIPELNANSVSCAEALK
MIESLREIANIEDAEELKANLSDLQKSTSSQLLQSWKGFQELNDKVRSRSSALNSSEHDL
LFETRPVEDYNIKEKALDIDELINELDVPEKVKEALAALSTGVSMSMDGNEINIYKKANE
KVESSPEGRLNANSTEVPKEEAEKDHVLNKEATVDVKSIIKTFTNIHHPKEVAENTVSQI
PESPSSRQEQYFSSKEHSFKEDYICHGNRQAANKEGAELEQDNWEEEEAKFTYKQVNHDE
EQTSSEIEQAYSLVLHDGYLDKPACSVEAREKDGDIQAGYVEEEESLKKEQEYYIENPPS
HVGQEVTSMELQVSCKESVEKDQASSEEEQKCHVEDQISHVESESKCVEEKWLKEEQQCH
IDDQPSYCGLQVSREERESTPEEQASSEEEFECHIGQNQSTPKEDQASSDEELERHVASK
PTHEEPEVKCTDVKVSSEENMSSLKEEQASLEEELDCHIENQPSHEEKGVKCTGVKVSSE
ENMSSFEEDQASLEEELECHIENQPSHEEKGVKCIEMQVSREEREYTPEDDRASLDEEEE
NRADNLPNANAHINVKDEQTHLWMKQTTEKEIVSTVIEMKPSLVKQHSSDDRMDKDSGKD
SEQHVSFEQQSDTVEEANVEDNRRGTEKKQVRCEEKLPSSEAEHVGVKDEPYTEDESYAE
YEESFVEKQPFEEDTNYEMTEAKTTSRFEEPLPSVAERVKLLDKKIADVGPGDCVPIEEN
RWLLRESVIRKSVSEPINIYKNTSALTEDECKDAKEDVPYSLFGHTDREDMVKTVKPFVA
KCTYFNLPHGCDSDPYQDDLSSVSKGSAMGDVSKDSKDNAEEPKLWAEKNGTLPDFSPTD
FKMPDNKVHPLIEGPGGGKVVVVQPGKGQSGKGQTDVKKIPQEPDALEMLYFSCGQHCPI
L
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtgggtccaagaaggcccccccaggaccagtcctcggggagtgggcacaca
gtgaccacatcacgtcacccctatatcacagaccccatcgcctccaagcacgtctgcttc
tacaagagcggggaccctcagttcagtggcctgcgcatggccatcaacagccgcaccttt
aagaccttcgatgccctcctggacagcctctccaagaaggtcccgctgccgttcggagtg
aggaacatcaccaccccgcggggtgtccatgcggtgcacacactagatgaactggaggat
gggaaggcctacatctgctcagaccagcggaaggtcaaacccatcaacatggcagcagcc
agtaagaagcttccgccctggtaccatgccaggcccatgagcgcccgccgtagggccttt
caactggccaaacagaaccctggcaggcccatgcgcaaaaaaaaacctgtgactgtgcgc
acacctaagaggctaatggtgtttcggaatggggacccaagtgtcaagcacaatatgatg
ctacagaagaggaccactcccacctttgaggcgctgctggattacgtgtccgagttgatg
cactttcctgtggtcaaactacacacaccggatggaagaagggtagatgggctccctgct
ctgattctatgctctggaattgtagtagctgccggtcgggaggcctttaagtctggaaac
tacaagacacagagatcttctgctccaacatggcttcctgccagacgaatggcatctaaa
agactaaaacaaccggcaccccggaaaaagaagtccgtgtccagcagcaaatcacatctt
ttctcctcatcgtcagagagatactttgtgaatcagatacaccactccgttgcaggaagt
cagtgtgacctccccagtaacaacacgggatctgtggtgctggaggctggccattttctg
gagtcagttgccgaaacggacgccgacacctacaacggacatgaaggggcagacaactgt
atgcccggtgatgatgacattgagaagtcctttcgggtgaaccaggatggcagcatgacg
gtagagatgaaggtacgactgaccatcaaggaggaggagaccatccactggaccaccacc
ctgaccaggtccagtgtggccagccagctcagtgtggctgagtctgagctggagatcaga
tctcctgagtccaatgccctaccaccaacacaacccaacgccatgggcaccatcaatggg
tacaatgctaaaaaggatgatcatgatgatgaggatgatatgtctccagaggccagtgga
cctaccagtgtggaaggagatgatgaggataattctaaaatacatgtcagtgaggtctct
ctcaggagggctcctaccccaggacccaggagatccagacagaagcaggcctcattggag
aacatcaacacaccatcaggagatgagattcaggagaacattgtgggatcatactcctac
agagagacaactaagaatggagaggtcaaagaggagtactgcatggtcagacaatgcagc
agcaggccagtccctaaaccaaggagagttggctctatggatatcaacaattacaataag
actcaatccacttttaaatcaggggcggctgagatcttacaaatccaaaatagcgaggag
gaagtcagagaaagtgtaatgcagatatacgagcagcagacctgtcaggacaatttcctt
gctaacagccagtacagtgtccagggtgtgtccacgtatggtctgatgtatgggagacca
gccacctcggaaacagcccgcttctcctctagtaatgacttagagatggagctggaaaga
ctctctacagcctcagagtcaatcagcgtgcggagggctgaccagtctctgtcatctgac
ttcaccatacccacatttaaggctggaggatctgtcctaagaaacagggtactaaatgtc
cataaaaccagtctctccaagcccaccaaagacaacgagaccccaaagttggtctctgaa
gaaagcaaagaaaattccaccactaaagctgtaaagaaagtcaagaaaaggttctcaaag
cccaagttgagaaagtaccaggttcgtaagagtacaacaccagacaaaagacgtaaagag
agtagtgcaaatagtcctgaaaacaataaaagagtgaaaactggggggtttagccgcaat
gcatcgataaggaaaatttatggaccaaaacctgccagaagtctaatgaaaaataaacta
aaaggaaaggaaatcaaattaaatattgaaaacccaaaggaattgtcagtgaaagaacta
aatgttagtgaaaatggaaatggaacgtcagtttcagtaaagaagaaattattgcacgtt
tcatttcctacggaggcccaggggaagggaacactgaaaaggcagaggtccgtgcacgag
gagagaaggattgcgaaagagtgtcatgatttgtcactgcctgcactcctttcgtcctct
tctaatatcaatgaatatgttgagaactggctagagaaagccctcccaactgtgtaccca
gacccagtggaggaaactcaaaatgtggagacaccaacaatgtctcaggtagaaactgag
ggggaccttgttccagatgtgtcagaaatcaattgtgaaatggacattgaagaagatgag
tcttgttttttgaaagaaaaaacacaaataccaagtagtccatctttggtaacagcagca
tttccaaatagaacatttgaaaatatagcaacacagacaaacctgactatggaaaacaca
acattaccatgtccttctgacccatcattgcaaaagaccccattacacattgatactata
caggaaaggttgcccactaatccctcagctgaaaatccacctctctccaacggcttctct
gtctttcctcctgcaataatctcggtagaaaagccatcaccctctgacagtccttcgttg
gaacaaacatcaatacccatcaagatctcagtagagaagctaccaatcccaaatgatctg
tcattggaaaatacatcagtaccaaatagctccttaaaagagaatatcccagtctcaaac
tgtctctcacctgagaagacaccactgcctgctaaaacacaaacagagaagacaccactg
cctgctaaaacacaaacagagaagacaccattgtccaacaaagtctcagatgggtcttca
gtagctagcagtccctcatatttaatgtgttcatcacctagtagtttaggtgatgaagaa
caacccttatcaagcagtccttcatcagacgaggctccgtcaacgactggccatgcattt
gaaaagacattgttcaaccactccactctgaaagaaccaccatcgcctaaactcgcaaca
aaaaagacacgattgctcagtaatctctccctggaaaagcaactatcattcaggaaagcc
gcagctgaaaagtcttcaatatccagtgatcctactgtggaaaaggtgttggtggataag
gcaccgatctccaatggtctctcatctgacaagacatcacatcctgctaaaaccttaata
tccaacaatgtcttaaatgaggcttcattagctagtagtccctcatgtttcatctcgaca
tcacctactaatcgcacatcagatgaaagagccttatcaatctcccccccatcagaggag
gatctatcacccactggccatgtattggaaaaaacaacattgttcaaccactccactctg
agagaaacatcatcacctaaactcccaacgaagaagacacgattgatcagtaatgtctcc
ctagaaaagcaactatcactcagaagattgtcagtgaataagtcttcattgtccagtaat
cctactttggagaaggcccagttatcaaatcctgttcaaatcacagcagacaaaacacaa
ctaccgaacagccactcattggaagagacatcgccaccaaataagtcttcattacccagt
gactccacttcagaaaatacccaattatctagcagtcctcaacaaggaaggacaccacta
ccaagacatatctctttgaaaacacaattgcacaacaatttttcacctgaaagaacaaat
ttacccactcttatgacgaggaataagtcagctcccagtaatctctcttcagaaaagata
ccagtacctagtaatcgcacattgaaaaacagactgtcaccatattctcagactttagaa
atagtgtcaccacctacgagactcaaggcaaaaaaaaagccagtatctagaaatcactct
ctggcaatcgaaccgtccccagtaagtcccaccttgaaaaggacacctctaccaaggaaa
agccgccaaacgccattatcgcctaagtcaacgccagtacatctcaattcctccatgaag
aagacaccaacacctcccagtcccgctttggtgaatcacgaagagacaaatggtgatgat
aacctgagcaattcggatcagggagacagtacaaaagtaacagcagaggagcctctaaca
aaagcacagataccatcatacagagaacaactacctccccagccagacatgaaacctgtg
ctagagaagctctgtttctcaattcggtcaattagacaaatcacacacaacaatcgtcca
tcttgtcttgaaaagtcaaacagcttacctgatttctcctcccatgtggcctctacattt
gggtcatcctccaaagctctcctggcattcttatctgttattaccttaaaggaaagcttc
actaactggaacatacctgaattgaatgcaaacagtgtaagctgtgctgaggctttgaaa
atgatagagtctctgagagaaattgccaacatagaggatgcagaggagttgaaagctaac
ctgtcagatttgcaaaagtctacttcctcacaactgctgcaaagttggaagggcttccag
gaactcaatgacaaagtcagaagtcgcagctcagcgctgaacagttcagagcatgatctt
ttgtttgagacacgcccagtggaggactacaacattaaagaaaaagcactggatatcgat
gagctaataaatgagcttgatgtgccagaaaaggtcaaggaagcattggcagccctttca
acaggggtgagcatgagcatggatgggaatgaaataaacatttataaaaaagctaatgaa
aaagtggagtcatccccagagggaaggttaaatgccaattcaaccgaagtccctaaggaa
gaggctgaaaaagatcatgtgcttaataaagaggctactgttgatgttaaatccatcatt
aaaacatttacaaatattcaccatcccaaagaggtggctgaaaatacagtgtcacaaatc
ccagagagcccaagcagtaggcaagagcagtacttctcctcaaaagaacacagctttaaa
gaggattatatttgccacggaaacagacaggcagcaaataaggaaggtgctgaacttgag
caggacaactgggaagaagaggaggctaaatttacatacaaacaggttaaccatgatgaa
gaacagacatcctcagagatagagcaagcttacagtttagtattgcatgatggctatttg
gacaagccagcctgttctgtggaggctagagagaaggatggggacatacaagcaggctat
gtggaggaggaagaaagcttgaagaaagagcaagaatactacattgagaacccaccaagt
catgtggggcaggaggttacatctatggagctgcaggtcagctgtaaggaaagcgtagaa
aaagaccaggctagctcagaggaagaacagaaatgtcatgttgaggaccaaattagccat
gtggagtcagaaagtaaatgtgtggaggagaaatggttgaaggaagagcaacaatgtcac
atagatgatcagccaagctattgtgggctgcaggttagccgtgaggaaagagagtccacc
cctgaggagcaggctagctcagaggaagaatttgagtgtcacataggccaaaaccagtcc
acccctaaagaagaccaggctagctcagatgaagagctggaacgtcatgttgctagcaaa
ccaacccacgaagagcctgaggttaaatgtacagatgtaaaggttagcagtgaggaaaac
atgtctagtcttaaagaagagcaggctagcttagaggaagagctcgactgtcacattgag
aaccaaccaagtcacgaggagaaaggtgttaaatgtacaggtgtaaaggttagcagtgag
gaaaacatgtctagttttgaagaagatcaggctagcttagaggaagagctcgaatgtcac
attgagaaccaaccaagtcacgaagagaaaggggttaaatgtatagagatgcaggttagt
agagaggaaagagagtatactccggaagacgaccgggctagcttagacgaggaagaggaa
aaccgtgcagacaaccttcccaatgcaaatgcacacattaacgtgaaggatgagcagact
cacttatggatgaagcagactactgaaaaggaaatagtgtctactgtcatagaaatgaag
cctagcttggtcaaacagcattctagcgatgacaggatggataaggacagcggaaaggat
agtgagcagcatgttagctttgaacaacagtctgatactgtagaagaagccaacgttgag
gataatcggcgtggcacagagaagaagcaagtacgctgtgaagagaagctgcctagctct
gaggccgaacatgttggtgtaaaggatgagccatatacagaggatgagagttatgcagag
tatgaggaaagcttcgtagagaaacagccgtttgaggaggatacgaattacgaaatgact
gaggcaaaaacaaccagccgttttgaggaaccattaccatctgtagcagagcgagtaaaa
ctactggataagaagattgctgatgtcgggcctggagactgtgtcccgatagaagaaaac
aggtggctcctcagagagagcgtgatcagaaagtctgtctcagagcctattaatatttac
aagaacacatctgcgttaacggaagatgagtgcaaagatgcaaaagaagatgttccatac
tcccttttcggccacaccgatcgggaggacatggtgaagactgtgaagccttttgtggca
aagtgcacctatttcaacctgcctcatggctgtgactcagacccgtaccaggatgaccta
agttctgtcagcaagggcagtgccatgggtgacgtctcgaaggacagtaaagacaatgca
gaggaacccaagttgtgggctgagaagaatggaaccctgccagatttttcccctactgac
ttcaagatgccagataataaagtgcaccctctgattgaaggcccgggaggtggaaaggtt
gtggtggtccagcctggcaaaggtcagtctggcaaaggtcagacagatgtcaagaaaatt
ccacaggagccagatgcactagagatgctctacttctcctgtggccagcactgccccatc
ctttga
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integrated database retrieval system
