Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366837
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Entry
139366837 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase, mitochondrial
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139366837
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139366837
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139366837
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
139366837
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class II (U)
139366837
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139366837
Prokaryotic type
139366837
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
139366837
NCBI-ProteinID:
XP_070960632
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Position
15:complement(32893778..33019709)
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AA seq
517 aa
AA seq
DB search
MVSSEHYVKHQQANKVNRKSRRLRRKQCSGSGRRNAIHGRHEGSSPRGFLYPWPAHPLIH
IPVRALCHHIFIITTVVVIIIITVAIITITTTLIIITLGIITLVITVIINTTSVDRILIL
RGPQVTPLPAPPTGEKIHSYTCDDFTNVTSKILAKVGRNLHNQAHHPLWLIIEQIKAHFY
RACIMHXGNPLYSVHDNLSPVVTTEQNFDSLLIRAXHSRRKRGVSYYLNRGTMLHAHISV
HQRELVCSGLDRFLLAGEVXPRDEIDASHYPVFHQMLGVRLFSNHQLLAKVLSGEDQSLF
ESGVSQTPQKQXDLKQTLDRVIRHLFGEELEIRWVECXFPFTHPSFEIEVHFQDDWLEVL
DCGVMELPLLHCLGSTKKMGCAFGLGLERLAIVLYGIPNIRFFWSQDNRFIKQFCLPNIN
NPVTFQPILKNPPLTNDIYFWXEGYTENDFYDLVRSIGRDLVEKIDQFTHPKMQKHSHCY
HITYRHMERTLTQVEVRFLNTAIEHTAEQELHVKWQY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtcagttctgagcactatgtgaaacaccagcaggctaacaaggtaaacaggaagagt
cgcaggcttcgcaggaagcagtgttctggcagtggcaggagaaacgccatccatggacgc
catgagggctcctcgcctcgcggcttcctgtatccatggccagctcatccgctcatccac
atccctgtgcgtgcgctttgtcatcacatattcatcataaccactgttgttgtcatcatc
atcatcaccgttgccatcatcaccatcaccaccaccttaatcatcattaccttgggcatc
atcactcttgtcatcacagtcatcatcaataccacctccgttgatcgcatcctaattctc
agaggcccccaggtcacccccctcccggcacctcccactggggagaaaatccattcctac
acttgtgacgacttcaccaacgtgaccagcaagatcctggccaaggtgggccgcaacctg
cacaaccaagcccaccatcctctctggctcatcatagagcaaatcaaagcccacttctac
cgtgcctgcatcatgcactagggaaacccgctgtactcggtccacgacaacctcagtccg
gtggtgacgacggagcagaatttcgacagcctgctcatccgggcctaacactcccgccgg
aagcgaggcgtcagctactacctcaaccggggcaccatgctgcacgctcacatctcggtc
caccagagggagctggtgtgctcgggactggaccgcttcctgctggcgggcgaagtgtaa
ccgagggacgagattgacgccagccactaccccgtgttccatcagatgttgggcgtgcgc
ctcttctctaaccaccagctgcttgccaaggttttgagcggagaggaccagtctctcttc
gagagcggggtgagccagacccctcagaagcagngagacctgaaacaaacccttgaccgt
gtgatcagacacctgtttggagaagagctggagatccgctgggtggagtgttagttccca
ttcacacatccctcctttgagatagaggtgcatttccaggatgactggctggaggtgttg
gactgtggggtgatggagctgccactgctgcattgtcttggctcaactaagaagatgggc
tgtgcatttggactgggcctggagcgcctggccattgtgctgtacgggatccccaacatc
cgcttcttctggagccaggataatcgcttcatcaagcagttctgcctgcccaacatcaac
aacccagtcaccttccagcccattttaaagaacccacctctgaccaacgacatctacttc
tggnccgagggctacacggagaatgacttctatgacctggtgaggagcatcggaagagac
ctagtggagaagatcgaccagttcacacatccaaagatgcagaagcacagccactgttac
cacatcacctaccgccacatggagaggaccctaacccaggtggaggtgcgctttctcaac
accgccatagagcacactgccgagcaggaactgcatgtaaagtggcagtactga
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