Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366885
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Entry
139366885 CDS
T10872
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139366885
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139366885
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
139366885
NCBI-ProteinID:
XP_070960724
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All DBs
Position
15:complement(7926522..7942163)
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AA seq
527 aa
AA seq
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MDGMGDVAVGVKRGSDELMSTSVYNSGSDMSSIGDVTANGSDSKSNGSDSKKLRVEDRME
APPSRVLHIRKLPNETSESEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMINYY
STVTPHVRNVPVFIQYSNHKELKTDSGNQRAQAVLQAVSAVQGGGTPASGSIVDLTAASS
PVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPPTAQQAKVAL
DGQNIYNSCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAIDPNMAAAFQGKD
SNSLLGGLSPLNAAAAAAAAAGRVALSGHSGASGVLLASNLNEEMVTPQSLFTLFGVYGD
AQRVKILYNKKDSALIQMADANQAQLAMSHLNGQKMHGKPIRVALSKHTSVQLPRDGLDD
QGLTKDFTNSPLHRFKKPGSKNFQNIFPPTTTLHLSNIPTDVSEEDLRLLFSNAGGTVNA
FKFFQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSTI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatgggagatgttgcagttggtgtgaagagaggatcagatgagctgatgtca
accagtgtctacaacagtggatctgacatgagcagtatcggtgatgttacagccaatggg
agcgacagtaaatccaatgggagcgacagtaaaaagctgagagtggaagaccggatggag
gcccctccctctcgtgtgctgcacatcagaaaactgcccaatgaaacttcagaatcggag
gtcattgccctggggttaccttttgggaaggtcacaaatatcctgacgcttaaggggaaa
aaccaggctttcttggagctgggcacagaggaagcagcgataaccatgatcaactactac
tctactgtgacaccgcatgttcggaacgtccccgtattcatccagtattccaaccacaaa
gaactcaaaacagatagtgggaaccagcgggcccaggcggtcctgcaggcggtgtcagcg
gtccaaggaggaggtactcctgcgtcgggctccattgtagatctaaccgccgcgtccagc
cctgtgctcagaataatcatcgataacatgttctacccggtcactctggatgtgctgcag
cagatcttctcaaagtttggcacggtcatgaagatcatcacattcaccaagaacaatcag
ttccaggctctgctgcagttcaacgacccacccaccgcccagcaagccaaagtagccctg
gatggtcagaacatctacaactcgtgctgtacgctccgcatcgactactccaagctggtc
aacctgaacgtgaagtacaacaacgacaagagccgtgactacacccggccagagctccct
gcaggggacggacagcctgccatagaccccaacatggcggctgcctttcaaggcaaggac
tccaactctctgctcggtggcctgagcccgctgaatgctgccgcggcggctgctgctgct
gcagggagggtagctctgtccggtcactctggcgccagtggcgtgctcctggcctccaac
ctcaacgaagagatggttacgccccaaagtctgtttactctcttcggggtgtatggtgat
gcccagagggtgaagatcctctacaataagaaagacagtgctctgatacagatggctgat
gccaaccaagcccagctagctatgagtcacctgaatgggcagaagatgcatgggaaacca
atcagggtggctctgtctaagcacacctcggtgcagctgcccagggatggactggatgac
cagggcctcaccaaagacttcactaactcgcccctgcaccgcttcaagaagcctggctcc
aagaacttccagaatattttccctcccaccactactcttcacctctccaacatcccaacg
gacgtttccgaggaagacctccgactgctgttctccaacgccgggggaaccgtgaacgcg
ttcaagttctttcaggatcacaaaatggcgctgctccagatgtcaacggtggaggaggcc
atccagggtctgatcgacctccacaactacaacatgggtgacaaccatcacctgagagtc
tccttctccaaatccaccatctaa
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