Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366979
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Entry
139366979 CDS
T10872
Name
(RefSeq) uncharacterized protein isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139366979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139366979
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139366979
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
139366979
NCBI-ProteinID:
XP_070960899
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All DBs
Position
15:complement(16733302..16766255)
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AA seq
1312 aa
AA seq
DB search
MRRAGQSDAARSTSDDSLSCRDGSSTDPDLQPRAWPRPLCDLYPTQGHVERAAPPSLLSG
CGAQVQLVTYDPHNEESRLNGLNTDTWSSRVIGHPEMKPYPSRIMRLFSTQRKCTVPGDS
PGSTRPLSFQGPQSSAVGPQAWPVLSGLAVMGSFKKLRSSVLQGIQNRGTANPDGEYISA
ANQGEYNGMVTTNQSLRLRCGEGYSVSSRVSIGQQMAGMSPYSSDNEEEEEVVDKEEGLQ
RTTRFSRSIRRAYGAGRISLLDTGQNGERGEGPGQGVSSNQRPGLGSSSGSEVNLHSEES
VNVLSRLTKSADNLHLKAPFRRKAPSPSPNDSPGTIGSVVANVGPSIQRSASVSSVDLRD
RSQSPGRLRSPLGARGHMLKLVGSMTDLTMRRRPNLSPVTCPGSPVTPLSPLSRLHDDYS
RRTPCLPAGDRQRRPSPARTRNVTLVSLEHTPTIHLQGRPDHVFSFPTYSEPLATTSSPL
RSSLCEGGRPQEGQGDGWRAQCYSTPLPQGEPCESHSKHQPEVNAEVKTAPKQCIWTRPD
QDQEELEDTSDEQGREALLGGEEAPSPSATGTTLTPTCSLDSPTSPILTTSPMATGATET
STSVTPRRRAGRSRPRPISDYAQLVARKYAIPEEEAELHPEERITNGTPCQDFKSNGGSQ
DSDSQENYNMNGDLRCRRRRPMSVIGGVDLYSSPGAEGREDRLPSLLSRPPVPSHQVPSY
RAVSARFRPSTFSQSTPIGLDRLGQRKLHRVLSADGGSECCAAVDGDSVSEEEGSFDELS
DVTTYLQPGVGLSALSQWISQGQAVYAEALWDHVTMEEQELAFKVGDVIRVLEAPHKDWW
WGMGADREAWFPSSFVRVRVNQEEDSGAESVERCALDQENPHTAPRDTHSAEHRHQMRTN
VVKEIMNTERIYIKHLRDICEGYIRQCGKNPGMFTELQLKTIFSNIEDIYKFQRQFLKDL
ERKYNTDQPHLSEIGACFLLQGEGFSIYSEYCNTHPAACGELQRLMKLGRYKHFFEACRL
LQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYGGVSDAYEAMKNVASLINE
GKRRLESVDAIAHWQVAILRWEGADVLERSSELIHSGELTRIVCQGNKTQQRSFFLFDHQ
LVFCKKDVLRRDLLYYRGRLDMDHTELLEMPDGRDPELGISLKNALRLRNSSTLETLCYL
CCRKPQDRQRWLQAFARERRRVQEDQETGMKISETQRKQAIFHARKSRQGKIKTMGYSGN
VPPHHQPLHPIHQRHVTVPTSVPQQQVFTLAEPKRKPAHLWYTFTRHTFFRK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgagaagggcggggcagagcgatgcagcccggtctaccagcgatgactccctctcctgt
cgcgatggctcctccaccgaccctgaccttcaacctcgagcctggccccgacccctctgc
gatctttaccctacccagggtcacgtggagagggcggcgcccccgtccctgctgtctggg
tgtggtgcccaggtacagcttgtgacctatgacccccacaatgaggagagtagactgaac
gggctcaacacggacacctggtccagccgagtgataggccaccctgagatgaagccctac
ccctccaggatcatgaggctcttctctacccagaggaagtgcaccgttcctggggacagt
ccgggctcaaccaggcccctctccttccagggccctcaatccagtgccgtgggcccgcag
gcttggccagtcctgtcagggcttgccgtcatgggctcctttaagaagctgcgctcctca
gtgctccaaggcattcagaaccgagggacagctaatccggatggggagtacatctcagca
gccaaccagggtgaatataatggaatggtcacaaccaatcagagcttaagactgaggtgt
ggggagggatatagtgtgtccagtagggtgtctattggccagcagatggctggtatgagc
ccttatagttctgacaatgaagaagaggaggaagtagtagataaggaagagggactgcag
agaacaacacgcttttcaaggagtatccggagagcatatggggcggggcgcatctcactg
cttgacactgggcagaacggggaacgcggggagggtccaggacagggggtttcatccaat
cagaggccaggtttaggctccagttcagggtctgaggtgaacctacattcggaagagagc
gtcaacgtgctgagcagactaaccaagagcgcagacaacctacaccttaaggcccctttc
agacgcaaagccccttctccctctccaaatgactcacctggtaccattggctctgtagtg
gccaatgtgggccccagcatacagagatcagccagtgtctcgtccgtggaccttagggac
cgcagccagagccctggtcgccttaggagtcccctaggggccaggggccacatgttgaag
ctagtgggcagcatgactgacctgaccatgagacgcaggcctaacctgtcccccgtcact
tgcccgggctcccccgtgactcccctgtcccccctcagccgtctccacgacgactactcc
cgccgtacgccctgccttcccgccggcgaccgtcaacggcggccctcacccgccagaacg
aggaacgtcactctggtatcactggaacacacgccgaccatccacctccagggaagacca
gaccatgtcttcagtttcccaacctatagtgaacctctcgctacaacctcatctcccctg
aggagcagcctgtgtgaggggggcaggcctcaggagggacagggagatgggtggagagct
cagtgttactccactccactcccccagggggagccatgtgagagccacagcaaacaccag
ccggaggtcaatgcagaggtcaagacggcaccaaagcagtgcatatggaccagaccagac
caagatcaggaggagctggaggacacatcagacgaacagggcagagaggcactgttaggg
ggtgaagaggcgccctctccttcagccaccggtaccactctcaccccaacatgttcccta
gattctcccacctcacccatattaaccacatcacccatggcaacaggcgcaacggaaacg
tccacgtccgtcacccccagacggagggcggggcgatcgaggcctcggccaatctctgac
tacgctcagctggttgccaggaagtacgccatccccgaggaggaggcggagctacatcct
gaggagaggattacaaatggaactccctgtcaggacttcaaaagtaatggaggctcgcag
gacagtgacagccaagagaactacaatatgaatggagatctccggtgccggagaagacgg
cctatgtctgtgattggaggagtggatctgtactcttcacctggcgctgaggggagagag
gaccgcctgccgtctctcctgtcacgcccccctgtcccatcccaccaagtgccctcctac
agggctgtgtcggccaggttccgcccctccaccttctcccagagcacccccattggactg
gaccgccttggacaacgcaaactacacagagtcctcagtgcagacggaggctcagagtgt
tgtgcagcggtggatggtgacagtgtgagtgaggaggaggggagcttcgatgagctcagt
gatgtcacaacgtacctgcagcctggggtggggctgtctgctctcagccagtggatcagc
cagggtcaagctgtgtatgcagaggccctgtgggaccatgtgacaatggaggagcaggag
ctggcgttcaaggtgggggatgtgatccgggtgctggaggcccctcacaaggactggtgg
tggggcatgggggcagacagggaggcctggttcccctccagcttcgtcagggtgcgtgtg
aaccaggaggaggattctggagcggagagtgtagagcgttgtgctctggaccaggaaaac
ccacacactgccccccgggacacacacagcgctgagcaccgccaccagatgaggaccaac
gtggtcaaagagatcatgaacacagaacgcatctacatcaaacacctccgggacatctgt
gagggctatatccgtcagtgtggtaaaaacccaggcatgttcactgagctgcagctgaag
accatcttcagtaacatcgaggacatctacaagttccagagacagttcctcaaagacctg
gagaggaagtacaacacagaccagcctcacctcagtgagataggagcctgtttcctctta
cagggggagggtttttctatctactctgagtactgtaacacccaccctgcagcgtgtggg
gagctgcagcgcctcatgaagctgggtaggtacaagcacttctttgaggcctgccggctg
ctgcagcagatgattgacatctccatcgccggcttcctgctcacgcccgtccagaagatc
tgcaagtaccccctgcagctgggagagctgctcaaatacacccccaaagaccacagtgac
tacggtggagtgagtgatgcgtacgaggcgatgaagaacgtggcgagcctcatcaatgag
gggaagaggcgcctggagagtgttgacgccatcgctcactggcaagtggccatcctacgc
tgggagggagcagacgtgttggagcgcagctcggagctgatccactctggagagctgacc
cggatcgtgtgccagggcaacaagacacagcagcgcagcttcttcctgttcgaccaccag
ctggtgttctgtaagaaggatgtgctgcgccgcgacctgctgtactaccgcggccgcctg
gacatggaccacacggagctgctggagatgcccgacggcagggaccctgagctgggcatc
tcgctgaagaatgccctgcggctgcggaacagctccactctggagaccctgtgttacctc
tgctgcagaaagccccaggacagacagcgctggctgcaggcctttgccagggagagacgg
agggtacaggaggaccaagagacgggaatgaagatcagtgaaacgcagcgaaaacaagca
atcttccatgcgaggaaatcccgacaagggaaaattaagaccatgggctactctggcaat
gtcccgccccaccaccagcccctgcatccaattcaccagcgccacgttaccgtgccaacc
agcgtgcctcagcagcaggtgttcacattggccgagcccaagcgaaagcccgcccatctg
tggtacaccttcacccgacacaccttcttcaggaagtga
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