Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366994
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Entry
139366994 CDS
T10872
Name
(RefSeq) ras-responsive element-binding protein 1-like isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139366994
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139366994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
139366994
NCBI-ProteinID:
XP_070960933
LinkDB
All DBs
Position
15:17655843..17732369
Genome browser
AA seq
1831 aa
AA seq
DB search
MWELLQDGWKSIPVMESATEDKRPGGGVSAELSTVETEHSEGQETPDSTHTQDEHTGSNG
AMEEGEEEDENGENMTEGVDLSSINAMLSTVMNAGQLNGAMEPSSAPASTPSISISKTTP
PRPTSVNRNARRNTEAKDVNTDFICPLCDKDCMTQHQLTMHIRQHNSDNGATDHSCSICG
KALSSASSLDRHMLVHSGERPYKCSFCGQTFTTNGNMHRHMKIHDKDPAGVIPISPPSPT
KRRRPSAKRRSAMDEDTERGDELPNKKVLEESVLEELGSGQGDDEVLPCPICFKTFGCKY
DLEVHMDTHPDTTLRCDLCCLSFRTHRGLLRHNAGIHKKMPTDPGGRPFIQNNPSIPSGF
NDLAFIDFSCRKFSHIAQVWCETNLRRSTSKFHRFVCEACDKAFPLHSALDLHKTTIHQQ
QPSPVGGGQEIPAVQEKPTTPPPQQASFLESLGLQHISQVKPQPSEDEVRQAQLDSIRVI
QVEPPDSTLPQEAASTASGFLGGLGLVAASSLQGLSQREALSLFSLQPFPTGFLFQSDSS
TAVKPVCGEAGLIELADIQQILKVALAAPGQMGLLPTLAKAPHQGVSGQAQAASCKPMPP
LKPKPMVAPRSSPAASTPPPLQSTQQASLGCISPSLPPPPSQLLNMPQESSSSSSSSSSS
SGSQASLEKMQMEADCMGDAHMPNDLTELQIKQEEGQAAGGKKGSGGANRGGAKASYPCR
FCDQVFAFSGVLQAHMRFHLGILPHQCNICDYVAPDKATLIRHLRTHSGERPYVCRVCHY
PFTVKANCERHLRKKHMKNTRKEIEKNIKYVSSTTTQDPLELVAAGDTACRFCGEDLKSY
RALQIHLRTHNGCQRKPFECRRCGAAFLAKRNCIHHMLKQHPEVQEREIEEHIATLLPAI
TASTSRASPSNPLALNGLTPNPTATLQPVKVEDLSIYSSSGDLDQPLDFSNKSRGTSSTA
GSLTGSPGIKLETVSPAAYDCSMEPIDLSIPKNPSKRQKTDTTAVAPVSVERREIKKELP
FPSVLDHLPSALQLDKSTEEKLTTPQSGSYQLPPVTPSPFPIGTTTGRALRLKPLLPKPA
STSSSCSLKELPPLASIAQIISSVSGAPDLLKREPDNKAPAALNGLQTEPDRPAGGDNSS
ETSMEELPLEGLSRKRTRKKPVSQAKTMAPACVSTLEQNTGSGLDLESSGEFASVEKMLA
TTDANKFSTYLQTGAAELGRRNEGRQSPGEEKEEKESPPQSVPPQSKGGKKNAYSNSVQK
MTCPFCPRVFPWASSLQRHMLTHTVFSNVLSATGQKPFPCPKCDAFFSTKSNCERHLLRK
HGVTNRSLRRNGQVSKNGDEGSHDSGESSENEQTAGEVLDLSSMDPDQKGDAYESPNADQ
TPDFAEQLLGEMEPQPSNNKTNNNYENEDYDDNDSQSNKSLDLNFASKLIDFKFSSDGEQ
PQTSLGGERVVVAEPERVMDVQQQDQESSKYTCKNCKKNFRYAATLARHEKAHLCESAPP
EEACGTEGTGLGTELPNATTATTEEEDQEEEGEKEAPESEGAGSVMDSGSEEEEKEKEER
SDEEGGLAEPKNGEGEVGRGSGSKADKRKKICNVCSKRFWSLQDLTRHMRSHTGERPYKC
QTCERTFTLKHSLVRHQRIHLKPRGSDGADANGAEAPAGDSASEEGECTPTSTCPPSENE
SEGTGVAREGAEKEAPLPGSTSPDQSLSTTEPAQSESATEAVAELLIKPASEPGSEPVLD
PSVEQASDNVSELAAVESASITASTTATEPATETPKESSTESPTPQPSDVTPEKDPEGPS
EGFIQGLLEIHTKPPREFILPAGEAPLVGVE
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaactccttcaagacggttggaaaagcattccagtgatggagagcgccacagaa
gacaagcgtccggggggaggggtgagcgctgagttgagcactgtagagactgagcactct
gaggggcaggaaacccccgactccacacacacacaggacgagcacacagggagtaatgga
gctatggaggaaggagaggaggaagatgaaaatggagagaatatgacagagggcgtggac
ttgtcatccatcaatgccatgctgtcaacggtgatgaacgcaggccagctcaacggcgcc
atggagccctcctcagcccctgcctcaacaccttccatctccattagcaagaccacccca
cccagacccactagtgtcaatcgcaatgccaggagaaacacggaagccaaagacgtcaat
acagatttcatctgtccgctgtgtgacaaagactgtatgacccagcaccagctcactatg
catatccgacagcacaactctgacaacggggcgacggaccactcatgcagcatctgtggc
aaggccctgagctcagccagctcgctggaccgccacatgctagtgcacagcggagagagg
ccctacaagtgctccttctgcggccagaccttcaccaccaacggcaacatgcacagacac
atgaagatccacgacaaagacccagccggcgtcattcctattagccccccctcgcccacc
aagagacgccgcccctccgccaagaggaggtcagccatggacgaggacacagagcgaggc
gacgaactgcccaacaaaaaggtgctagaggagagtgtgttggaggaactgggatcaggc
cagggggatgatgaggtgttgccgtgcccgatctgcttcaagacctttggctgcaaatac
gacctggaagtccacatggacacacaccctgacaccactctcaggtgtgacctgtgctgc
ctctccttccggacccaccgcggcctgctgcggcacaacgccggcatccacaagaagatg
cccacggaccccggcggacggcccttcatccagaacaacccctccatcccctctggcttc
aacgacctggcctttatcgacttctcctgccgcaagttttctcacatcgcccaggtctgg
tgtgaaaccaatctccgccggtccaccagcaagttccaccgttttgtgtgcgaggcctgc
gacaaggccttccccctacactcggccctagacctgcacaagaccaccattcatcagcag
cagccgtcgcccgtagggggcggccaagagatccctgcggtccaggagaagccgacaacc
ccgccccctcagcaggccagcttcctggaatccctgggtctgcagcacatttcccaggtc
aagcctcagccttctgaggatgaggtccgtcaagcccagctggacagtatccgggtcatc
caggtggagcctccggactccaccctgccccaagaggcggcttccacagcttctggattt
ctgggcggcctgggcttggtggctgcttcgtccctgcagggcctgtcccagagggaggcc
ctcagcctgttctccctgcagcccttccccacgggcttcctcttccagtcggacagtagc
accgctgtcaagcctgtctgtggcgaggctggcctgattgagctggctgacatccagcag
atcctgaaggtggccttggccgcccccggtcagatgggcctcctgccgacactggccaag
gccccgcaccagggagtgtccggccaggcccaagcggccagctgcaagcccatgcccccg
ctgaagccaaagcctatggtggcaccgcgctccagcccggctgcctccacgccaccgccg
ctccagagcacccagcaggcttccctgggctgcatcagccccagcctgcccccgccgccc
agccagctgctcaatatgccccaagagtcttcatcatcatcatcatcatcctcctcttcc
tcgggcagccaggcctccctggagaagatgcagatggaggcggactgcatgggcgatgcc
cacatgcccaacgacttgacggagctgcagatcaaacaagaggagggccaggcggctggg
ggaaagaaggggtcaggaggggccaaccgcgggggtgctaaggcatcctacccctgccgt
ttctgtgaccaggtgtttgccttctccggggtgctgcaggcgcacatgcgcttccacctg
ggcatactaccgcaccagtgcaacatctgtgactacgtcgcacccgacaaggccacgctc
atccgccacctgcgcacgcacagcggcgagcgcccctatgtgtgccgtgtctgccactac
cctttcaccgtcaaggccaactgcgagcgccacctgcgcaagaagcacatgaagaacaca
cggaaagagattgagaagaacatcaagtacgtctcgtcaaccaccacccaggatcctttg
gagctggttgctgccggcgacaccgcctgccgcttctgcggtgaggatctaaagagctac
cgggctctccagatccacctgcgcacccacaacggctgccagcgcaagccctttgagtgc
cggcggtgcggggcggctttcctggccaagaggaactgcatccaccacatgctcaagcag
cacccagaggtgcaggagcgggagatcgaggagcacatcgccacccttctccccgccatc
acagcctccacctccagggccagtcccagcaaccctctggctctcaatggcctcacgccc
aaccccactgccaccctgcagccggtcaaggtggaggatctcagcatctactcctcctct
ggtgacctggatcagcccttggacttctccaacaagagccgcgggacaagcagcactgcg
ggtagcctgaccgggtctcctgggatcaaactggagacggtcagcccagcagcttacgac
tgctccatggaacctattgacttgtccatccccaagaaccccagcaagaggcagaagacc
gacaccaccgctgttgccccggtgagcgtggagcgcagagagatcaaaaaggagctgccc
ttccccagcgtactggaccacctcccctcagcccttcagctggacaagagcactgaggag
aagctgacaaccccccagtctggctcttaccagctccccccagtgaccccctccccgttc
cccattggcaccaccacaggccgggcgctccgtctcaagcccctactgcccaaaccagcc
tctacctcctcatcctgctctctgaaagagcttccccctttggcttccatcgcccagatc
atctcctctgtctcgggggctccagacctactcaagagggagccagataacaaggctcct
gccgccctcaacggcctccagacagaaccggaccgtccagctgggggtgacaacagctca
gaaacatcgatggaagagctccccctagagggcttgtccagaaagcgcactagaaagaag
ccagtgagccaggccaagactatggcacctgcctgtgtgtccacgctcgagcagaacaca
ggcagcggcttggacctggaatccagtggtgagttcgccagcgtggagaagatgcttgcc
accaccgacgctaacaagtttagcacctacctgcagacgggggcggcagagctgggaagg
cggaacgaggggagacagagcccgggagaggagaaggaagagaaagagtcaccgcctcag
tctgtgccgccccagtccaaaggagggaagaagaatgcctactccaactcagtgcagaag
atgacctgtcccttctgcccccgggtcttcccctgggccagctccctgcagagacacatg
ctcacacacactgtcttctctaatgtgctgtcggctacaggtcagaagcccttcccctgt
cccaaatgtgacgccttcttctccaccaagtccaactgtgagcgccacctgctgcgcaag
cacggcgtgaccaaccgctctctgcgccgcaacggccaagtatccaagaacggcgatgag
ggttcacacgacagcggagagagttccgagaatgagcagactgcaggagaggttttggat
ctgagcagcatggaccctgatcagaaaggcgacgcatacgagtcgccaaacgcagaccaa
acaccagactttgctgagcagctgctaggggagatggaaccgcaacctagcaacaacaaa
accaacaataattatgaaaatgaagactatgacgacaatgattcacagagcaacaagagc
ttggacctcaacttcgccagcaagctcatcgacttcaagttctcgtcggatggcgagcag
cctcagacctccctgggtggagaaagggtggtggtggccgagccggagagggtgatggac
gtccagcagcaggaccaagagtcctccaagtacacctgcaagaactgcaagaagaacttc
cgctacgccgccaccctggctcgccatgagaaggctcacctttgtgagagtgcacccccc
gaggaggcttgtggaacggaggggaccgggctaggcacagagctccctaatgctactaca
gccaccactgaggaggaggatcaggaggaggagggagagaaggaggctccggaaagcgag
ggagcgggaagtgtgatggacagcggctcggaggaggaggagaaagagaaggaggagagg
agcgatgaggaggggggcttggcagaaccaaagaacggagaaggagaggtgggaagaggg
tcgggaagcaaagcagacaagaggaagaagatctgtaacgtgtgcagcaaacgcttctgg
tcactgcaggatctgaccagacacatgcgctcgcacacaggcgagagaccctacaagtgc
cagacgtgtgagcgcaccttcaccctgaagcacagcctggtgaggcaccagcggatccac
ctgaagccgcggggcagcgatggagctgatgccaacggggcagaggccccggccggagac
tcggctagcgaggagggagagtgcaccccaaccagcacatgtcctccttcagagaacgag
agcgagggcactggagtggccagggagggagctgagaaagaggcccctctaccaggctcc
acatctccggaccaatccctgtccaccactgaaccagcccagtctgagtcagctacggag
gccgtggctgagctgctcattaagccagcctcggaaccaggctcggaacctgttctggac
ccatctgtagaacaggcctcggacaacgtctctgaactagctgctgtagaatcagcctca
ataacagctagtactacagccactgaaccagcaacagaaacccccaaagaatcctccaca
gagtcccccaccccacagccctctgatgtaaccccagagaaagacccagagggcccatcg
gaaggcttcatccaaggcctactggagatccacaccaagcctccccgggagttcatccta
cctgccggcgaggctcccttggtgggcgtggagtga
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integrated database retrieval system
