Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366996
Help
Entry
139366996 CDS
T10872
Name
(RefSeq) nebulin-like
KO
K25865
nebulette
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139366996
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139366996
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
139366996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
SH3_9
SH3_1
SH3_2
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
139366996
NCBI-ProteinID:
XP_070960942
LinkDB
All DBs
Position
15:complement(17747257..17805666)
Genome browser
AA seq
3005 aa
AA seq
DB search
MEETSEETGSLMEETSGKALTSMEGTLVETVTLMDGTSEETVTLMEGTSEETVTLMEGTS
EETVTLMDGTTEETVTLMDGTSEETVTLMDETSEETVILMDGTSEETVTLMDGASEETVT
LMEGASEETVTLMEGTSEETVTLMEGTSEETVTLMEGMSEETVSEEAVVVQRATGRVTWM
EEPSEETVLGEAAVDEHGTEGAVEAPTAKPVLRRPSVHVARRCSVLASDASAAKPVLPEP
GFARRCSVLASDVKYKEGYEKSKAQNLFIPDVEFQHSKNINAFISETKYKEEGKLETAMC
LYSVLPETMATQHAREASELQSEIKYKGNVKTEISTSLYSLLPETLEIQFAKEHSDMLSE
SKYREEGKREISSSLYSLLPDTTEMQLSKTVKEFQSENKYREAGKRRLSTSMYSLLPETM
EILHAKEASLLQSEMKYKELSKGTLSSLYSLLPETTEIQFAREMTEMQSENKYKESGKRN
SSSCIYSQLAETPETHFAKAVSELQSELKYREVLKKDTSPSFYSTLPETIETNFAKRQSA
MRSEKKYKEDRKENSFSLYSLLPETPETQFAKEVSDLQSELKYTEGGKQKISTSLYSLLP
ETTETQLAKQMSEMQSETKYKEVGKREVVTSLYSLLPETKDIQHAKEASLLRSEIKYKES
GKKDISTSLYSLLPETTEIQFAREMTEMQSENKYKEEGKRRISTSVYSQLPETTETQFAK
AVSELQSEMKYKEAGRKGVSSSLYSTLPETMETQHAKEASQLQSELKYKEGLKKDTSPSF
YSTLPETIETNFAKRQSSMRSQIKYKEDTEENSINLYSLLPETAETQFAKQMSEMQSETK
YKEAGKKEASTSLYSTLPETLETQHAKEASQLQSELKYKGEKVFSGSAYSQLPETMETER
ARELTEMQSEIKYKESGKKDNSTSLYSLLPETTEIQFAREMTEMQSKNKYKEEGKRRIST
SVYSQLPETTETQFAKAVSELQSEMKYKEAGRKGVSSSLYSTLPETMETQHAKEASQLQS
ELKYKEGLKKDTSPSFYSTLPETIETNFAKRQSAMQSQIKYKEDTEENSINLYSLLPETA
ETQFAKQMSEMQSERKYKEAGKKEASTSLYSTLPETLEIQHAKEASQLQSELKYKGEKVF
SGSAYSQLPETMETERARELTEMQSEIKYKESGKKDISTSLYSLLPETTEIQFAREMTEM
QSENKYKEEGKRRISTSVYSQLPETTETQFAKAVSELQSEMKYKEAGRKGVSSSLYSTLP
ETMETQHAKEASQLQSELKYKEGLKKDTSPSFYSTLPETIETNFAKRQSSMRSEIKYKED
TEENSINLYSLLPETAETQFAKQMSEMQSETKYKEAGKKEASTSLYSTLPETLETQHAKE
ASQLQSELKYKGEKVFSGSAYSQLPETMETERARELTEMQSELKYKQSGKKGMSQSVYSV
LADTMETQFLKNVSELQSQTKYKKAGKNKAKSLYSVLPETLEIQHAKQVSQLQSQLKYKD
AGKKEMSSSLYSVLPDTAETNLAKEHSEMLSEVKYKKEGKEGISSSLYSLLPETADTQFA
KQMSEIQSELKYKRYIEELPDTLYALLPETMETKFAKEMTQEMSQAKYKEAGKQQVSTSL
YSTLPETLETQHAKEASQLQSKNNYKEEGKKDMSTSLYSQLPDTIEIQFARELTELQSEN
KYKEDGKRSLSTSIYSQLAETKETQFLKAVSQLQSEKKYREAVKKQISLYATLPETLETQ
HAKEASLLQSELKYKQGGKKGSSSSLYSLLPETTETQLAKEQRDIYSEVKYKEDGKQKLS
NSLYSLLPETVDTQFAKQQSEFRSEQNYKSDTQELSNCLYALLPETMGTKFAKEMSQEIS
QSKYKEAGKKEASTSLYSTLPKTLETQHAKEASLLQSENKYKENVKLTQSSSLYSQLPQT
TETQFAAKVSDLQSENKYKEEGKKSISTCIYSQLPETKQTQFVKAVTELQSETKYKEAGK
KEASSCLYALLPETMETQHAKEASLLQSENKYKEGGKKESLTCLYSQLPETTEIQFAKTV
TELQSENKYKQKGKQEISSSIFSQLPGTKEIEFAKQISEMQSEQNYKSDTQEHSNCLYAL
LPETMETKFAKEMSQEMSQRKYKEAGKKEMGNSLYSLMPQTSEIQHAKELSQLYSQKSYK
EEGRKDTGHSLYSQMPQTIETAFAKEVAKHQSDKLYKEKYNAEKGQSTYTTMETLPEVSH
AMEVNKQQSEVNYRTGKQEHHNFTTLADRPDILNAKQATELASDVSYRSKTKHEIYNDVL
GRSDIEHAKVASKLASLVHYKEKFEREFKGQKPQYNPSNCVSFKHTQAAHALTSQVKYKI
NQNQVIEGSMDLPNLLQLKHTLHASKLQSNIEYKKKYEQSKGHYHIALDTAEQLHHRENA
VLHSQVKYKEEYERNKGKSQMEFVDTQSYRVSKEAQKMQSEREYRKEYDDHIRGKALVDV
DLTPGYLTARHASNVLSEKEYRREGLEVKGRGLSGLGLEDTPELIRAKNASHILNEKEYR
KDLENDIMGKGMEISGDVLEMQRAKKATELTSQASYKQTAQLRESSYGTVTDTPELLHAA
YMKDVYSQKKYKDEAEKLRGSYGFDTPEMERVKNNQRNISSCRYAWDSKLHRSLMSSVTD
TPEIILARENTKKISDVKYREGVGSGTAVMETLDTERVRRNQENISSVKYKKQLQATSVG
VTPELERVRQNQENISSVKYQRGMKEMKGRSCNELDTPELRRVRKSQNDISMAKYHEDFE
RTRGRGCTPVMEEQSMERMHHRNKLMMSEAAYKGVHPQVVEMDRRPGGIIVDGSSTLDST
HLARNYLKVWRTDPGSIFDFDPVEDNIQSKSLHRLSERASRLTRQQSQQSVHSQAQSVSS
LASASDLWDKSLSVCSSSSALQSQDRAPVLPGAYHQSAQQQQHGYGYMHQTSMSSVRSVQ
SPPSVTMRVYRALYDYSAQDHDEVSFRDGDVIVNAQPIDEGWMYGTVQRTGKSGMLPANY
VECFN
NT seq
9018 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacgtcagaggaaacgggcagcttgatggaagaaacgtcgggaaaagctctc
acctcgatggaaggaacattggtggaaacggtcaccttgatggatggaacgtcggaggaa
acggtcaccttgatggaaggaacgtcagaggaaacggtcaccttgatggaaggaacgtcg
gaggaaacggtcaccttgatggatggaacgacggaggaaacggtcaccttgatggatgga
acgtcggaggaaacggtcaccttgatggatgaaacgtcggaggaaacggtcatcttgatg
gatggaacgtcggaggaaacggtcaccttgatggatggagcgtcggaggaaacggtcacc
ttgatggaaggagcgtcagaggaaacggtcaccttgatggaaggaacgtcagaggaaacg
gtcaccttgatggaaggaacgtcagaggaaacggtcaccttgatggaaggaatgtcagag
gaaaccgtgtcggaagaagcagtggtggtccagcgtgctacaggacgagtcacctggatg
gaagaaccatcggaggaaacggtgctgggagaagcagcggtggacgagcatggcacagaa
ggggcagtcgaggcaccgactgctaagcccgtcttgcgcagacccagtgtgcatgtcgcc
aggaggtgcagtgttctagcaagtgacgcctcggctgctaagcccgtcttgcccgaaccc
ggttttgccaggagatgcagtgttctggcaagtgacgtgaaatacaaggagggctatgag
aaatccaaggcccagaacctcttcatccccgatgtagagtttcagcattccaagaacatc
aatgctttcatctctgagaccaagtacaaggaggaaggaaagttggaaacagcaatgtgt
ctctactcagtgcttccagaaacaatggcgacccaacacgccagagaggcctccgagcta
cagagtgagatcaagtacaaagggaatgtgaagacggagatatccacttctctctactca
ctgctcccggagacccttgagattcagtttgcgaaggagcattcggacatgctgagtgag
agcaagtacagagaggaggggaaaagggagatctccagcagcctgtactcactgcttcca
gacaccactgagatgcagctctctaaaacagtgaaagagttccagagtgagaacaagtac
agggaggcagggaagagaaggctgtctacttccatgtattccctgctaccagagaccatg
gagattctacacgccaaagaggcttctctgctacagagtgagatgaaatacaaagagtta
agcaaaggtactctgtcctccctctactctctactcccagagaccacagagatccagttt
gccagagaaatgacagagatgcagagcgagaacaaatacaaagaaagtggcaaaaggaat
tcctccagttgcatttactctcaactagcagagacccctgagacccattttgctaaagct
gtgtcagaactccagagtgagctaaagtacagggaagtactgaaaaaggacacctccccc
agtttttattctacgctgcccgaaacaattgagactaattttgcgaaacgacaatcagca
atgcgaagtgagaaaaaatataaagaagacaggaaggagaactcctttagcctctactct
ctgctcccggagacaccagagacccagtttgcaaaagaggtctccgacttacagagcgag
ctcaagtatacagagggggggaagcagaagatctcgacaagcctgtattctctgcttccc
gagaccacagagacccagttggccaagcagatgtctgaaatgcagagcgagaccaagtac
aaggaagtgggcaagagggaggtggtcacttctttgtactctctactccctgagaccaag
gacatccagcacgccaaagaagcgtccctgttaaggagtgagatcaaatacaaagagagt
ggaaagaaggacatctcaacctctctctactctctactcccagagaccacagagatacag
tttgccagagaaatgacagagatgcagagtgagaataaatacaaagaagaaggaaaaagg
cgtatctccacgagtgtgtactctcagcttccagaaaccaccgagacacagtttgcgaaa
gctgtatctgaacttcagagtgagatgaagtacaaagaagcagggaggaagggagtttct
agttctctctactccaccttaccagaaacaatggagacccagcatgccaaagaggcttcc
cagctacagagtgagctaaagtacaaggaaggattgaaaaaggacacctcccccagtttt
tattctactctgcccgaaacaattgagacaaattttgcgaaacgacaatcatcaatgcga
agccagatcaagtataaagaagatactgaggagaactctatcaacctctactctctgctc
cccgagacagcagagacacagtttgcaaagcagatgtctgaaatgcagagcgagacaaaa
tacaaagaagcagggaagaaagaggcctccacttctctctactccaccttaccagagact
ttggagacccagcacgccaaagaggcttcccagctacagagtgagctcaaatacaaaggt
gaaaaagtcttctctggttcggcttactctcaactccctgagacgatggagacagagaga
gctcgggagctcactgaaatgcagagcgagatcaaatacaaagaaagtggaaagaaggac
aactcaacctccctctactctctactcccagagaccacagagatacagtttgccagagaa
atgacagagatgcagagcaagaataaatacaaagaagaaggaaaaaggcgtatctccacg
agtgtgtactctcagcttccagaaaccaccgagacacagtttgcgaaagctgtatctgaa
ctccagagtgagatgaagtacaaagaagcagggaggaagggagtttctagttctctctac
tccaccttaccagaaacaatggagacccagcatgccaaagaggcttcccagctacagagt
gagctaaagtacaaggaaggactgaaaaaggacacctcccccagtttttattctacgctg
cccgaaacaattgagacaaattttgcgaaacgacaatcagcaatgcagagccagatcaag
tataaagaagatactgaggagaactctatcaacctctactctctgctccccgagacagca
gagacacagtttgcaaagcagatgtctgaaatgcagagcgagagaaaatacaaagaagca
gggaagaaagaggcctccacttctctctactccaccttaccagagactttggagatccag
cacgccaaagaggcttcccagctacagagtgagctcaaatacaaaggtgagaaagtcttc
tctggctcggcttactctcaactccctgagacgatggagacagagagagctcgggagctc
acagagatgcagagcgagatcaaatacaaagagagtggaaagaaggacatctcaacctcc
ctctactctctactcccagagaccacagagatacagtttgccagagaaatgacagagatg
cagagtgagaataaatacaaagaagaaggaaaaaggcgtatctccacgagtgtgtactct
cagcttccagaaaccaccgagacacagtttgcgaaagctgtatctgaacttcagagtgag
atgaagtacaaagaagcaggtaggaagggagtttctagttctctctactccaccttacca
gaaacaatggagacccagcatgccaaagaggcttcccagctacagagtgagctaaagtac
aaggaaggactgaaaaaggatacctcccccagtttttattctacgctgcccgaaacgatt
gagacaaattttgcgaaacgacaatcatcaatgcgaagtgagatcaagtataaagaagat
actgaggagaactctatcaacctctactctctgctccccgagacagcagagacacagttt
gcaaagcagatgtctgaaatgcagagcgagacaaaatacaaagaagcagggaagaaagag
gcctccacttctctctactccaccttaccagagactttggagacccagcacgccaaagag
gcttcccagctacagagtgagctcaaatacaaaggtgagaaagtattctctggctcggct
tactctcaactccctgagacgatggagacagagagagctcgggagctcacagagatgcag
agcgagctcaagtacaaacagagtgggaagaagggtatgtcccaaagcgtctattccgta
cttgcagataccatggagacccaatttctcaaaaatgtttctgaactgcaaagtcagact
aagtacaagaaggcagggaagaataaggcaaagtctctctactctgtgttgccagagact
ctggagatccaacatgccaagcaggtctcccagcttcagagccagctcaaatacaaggat
gccgggaaaaaggagatgtccagttctctttactctgttctccccgatacggcagagact
aatttagccaaagagcactctgaaatgctgagcgaggtgaagtataaaaaggagggtaaa
gaaggcatttcctcaagcctttattctctactcccggaaacagcagacactcagtttgcc
aaacagatgtcagaaatacagagtgagttaaagtacaaaagatacatcgaggaactgccc
gataccttgtacgcactactgcctgaaaccatggagaccaagttcgcaaaagaaatgact
caagaaatgtctcaggccaagtacaaggaggcaggcaagcagcaggtctccacttctctc
tactccaccttaccagagactttggagacccagcacgccaaagaggcctcccagctacag
agcaagaataactataaagaggaaggcaaaaaggacatgtcaacttccttgtattctcaa
cttcctgacacaatagagatccagtttgcccgagagcttacagagctccaaagtgagaac
aagtataaagaagatgggaaaaggagtctttcgacaagcatttattctcaactagcagag
accaaggaaacgcagtttttgaaagccgtttcccaactccagagtgagaaaaagtataga
gaggcagtaaagaagcaaatatctctctatgccaccttaccagagactttggagacccag
cacgccaaagaggcttctctgctacagagtgagctgaaatacaagcaaggtggcaaaaag
gggtcctccagttctctgtactccctgcttccagaaacgacagagacccaactagccaaa
gagcagcgtgatatttatagtgaggtgaaatacaaagaggatggtaaacagaagctttcc
aacagcctgtattccttgctgccagaaacagtggacacacaatttgccaagcagcaatca
gaattccgaagtgagcaaaattacaaaagtgacacccaggaactgtccaattgcttgtac
gcactactgcctgaaaccatggggaccaagttcgctaaagaaatgtctcaagaaatatct
cagtctaaatacaaggaggcagggaagaaagaggcctccacttctctctactccacctta
ccaaagactttggagacccagcacgccaaagaggcttctctgttacagagtgagaacaag
tacaaggagaatgtgaaactgacccagtccagtagtctgtactctcagctcccccagact
acagagacccagtttgctgccaaagtctctgacctccagagcgagaacaagtacaaagag
gaaggtaagaagagtatctctacctgcatttactctcaactaccagagaccaaacagacc
cagtttgtgaaggctgtgaccgaacttcagagtgagactaaatataaggaagcagggaag
aaagaggcctccagttgtctctacgccctgttaccagagactatggagacccagcacgca
aaagaggcttctctgttacagagtgagaataagtacaaagaaggcggtaaaaaggagagt
ttgacctgcctgtactctcagcttccagaaaccactgagattcagtttgctaaaacagtg
acagaactgcagagtgagaataaatacaaacagaaagggaaacaggagatatccagcagc
attttctctcagctgccggggacaaaggagatagagtttgccaaacagatttcagaaatg
cagagcgagcaaaattacaaaagtgacacccaggaacattccaattgcttgtacgcacta
ctgcctgaaaccatggagactaagtttgctaaagaaatgtctcaagagatgtctcagagg
aaatacaaagaagctgggaaaaaggagatgggcaactctctgtactccctcatgccccag
accagtgagatccagcatgccaaagagctctcccagctctacagccagaaaagctacaaa
gaagagggtaggaaggacacaggccacagtctgtactcacagatgccccagaccattgag
actgcatttgctaaagaagtggcaaagcaccagagtgataaactgtacaaggagaagtac
aacgcggagaaaggccagtccacttacaccaccatggagaccttaccagaggtctcccac
gctatggaagtcaacaaacagcagagcgaagtcaactacaggacaggaaaacaggaacac
cacaatttcaccacattggcggacagacctgatatcctgaacgccaaacaggccactgaa
ctggccagcgacgtgtcctataggagtaaaactaagcatgaaatctacaatgatgttctg
ggaagatctgatatcgagcatgccaaagtggcctccaaactcgctagcctggtgcactac
aaggagaagtttgagagggagttcaagggtcagaagccccagtacaaccccagcaactgt
gtgtccttcaaacacacacaggctgcccacgctctcaccagccaggtgaagtataagatc
aaccagaaccaggtgatcgagggatccatggacctgcccaacctactacagctgaaacac
actctacacgccagcaagctgcagagcaacatagagtacaagaagaagtacgagcagtct
aagggacactaccatatagcactggacacagcagaacagctccaccacagggagaatgcg
gtactgcacagccaggtgaaatacaaggaagagtatgagagaaacaaaggcaagtcccag
atggagtttgtggacacacagtcttacagagtgtccaaggaggctcagaaaatgcaaagc
gagagagagtacaggaaggaatatgatgaccacatccggggcaaggccctagtggatgtt
gacctgacccctggatacctgactgcccgccacgccagcaacgtcctgagtgagaaggag
tacaggagggaaggactggaggtgaaggggagggggctctcagggctgggattggaggac
acaccagaactgatacgggctaaaaatgccagccacatcctcaatgagaaagagtaccgc
aaggacctggagaatgacatcatgggtaaaggcatggagatcagtggtgacgtgttggaa
atgcagagggccaagaaggccacagagttaaccagccaggcctcctacaagcagacagcc
cagctgagggagagctcgtacggtacggtgacggacacaccagaactactgcacgccgcc
tacatgaaagatgtctacagtcagaagaagtacaaggatgaagcagagaagctgaggggt
tcgtatgggttcgacacccccgagatggagagagtgaagaacaaccagagaaacatcagc
tcatgtcggtacgcttgggactcaaagctgcacagaagcctgatgtcttctgtcaccgac
acgccagaaatcatcctcgccagagagaacacaaagaaaatcagtgatgtgaaatacaga
gagggggtggggagcgggacggcagtcatggaaacccttgacacggagagggtccgcagg
aaccaggagaacatcagctctgtgaagtataaaaagcagctgcaggccaccagtgtagga
gtcaccccagagttggagagagtccgtcagaaccaggagaacatcagctcggtgaagtac
cagcgcgggatgaaagagatgaagggccggtcctgcaacgagttggacacgcccgaactg
aggcgtgtcaggaagtcccagaacgatatctccatggcgaaataccacgaggactttgag
cggactaggggccgaggctgcaccccagtgatggaggaacaaagcatggagagaatgcac
caccggaacaagctgatgatgagcgaggcagcctacaagggagtgcacccacaggtggtg
gagatggacaggagacctggaggcatcatcgtagacggaagctccacattggactctact
cacctggcccgaaactaccttaaggtgtggcggacggacccaggctcaatctttgacttt
gaccctgtggaggataacattcagtctaaaagtctccacagactgtctgagcgtgcgagc
cgcctcacccggcagcagtctcagcagtcggtgcactcgcaggcccagtccgtgagttca
ctggcctctgcctctgacctgtgggacaaaagcctgtctgtctgcagcagcagctccgca
ctgcagtcccaggacagagctcctgtgctacctggggcgtaccatcagagtgctcagcag
cagcagcatgggtatggctacatgcaccagaccagcatgtcctctgtgaggtctgtgcag
tcccccccatctgtcaccatgagagtgtaccgggcgctgtacgactactcagcgcaggac
cacgacgaggtgtccttccgcgacggtgacgtcatcgtcaacgctcagcccatcgacgag
ggctggatgtacggcaccgtgcagaggaccggcaaatcaggcatgctccccgccaactac
gtggagtgcttcaactaa
DBGET
integrated database retrieval system
