Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367108
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Entry
139367108 CDS
T10872
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139367108
Enzymes [BR:
ocla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
139367108
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
139367108
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
139367108
NCBI-ProteinID:
XP_070961299
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Position
1:complement(14547498..14558324)
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AA seq
468 aa
AA seq
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MELPTADGVSAPLPGRCAFYVEKKKRYCKMIVGSGKAYCGEHANAEKDCEKKRIPCPLDP
KHTVFEDLLAKHLKKCNSREKPKPLFYVQDINAGPAIVEDTPKDEVPLSDRSKAELNLLI
KKLKTAVKGFKCKHEENIQSHPALHEALNDPRNGDSAFKHLKQQASLLGNMEDLHLLGPN
RCFVEFGAGKGKLSHWIHVALKAYDDIHFLLVERSSARFKVDGKHQNSDTKFERLQVDIQ
HLDLRKVPLLQEKGLPVVGVGKHLCGAATDLALQCLLGSSETAPHGIKDQPPSKRSKLQQ
QPGESTGPELQPIPRVAGETAAGQELRVDGVAIALCCHHRCDWRHYVGKEFFKEKGLGAS
EFAAFLRMSSWATCGSRQATQTSPPQGQTDQTFEEEEHEATEEAELDSLEGVLNAEDREH
IGRLCKMLIDQGRVHFLQQKGFDSRLLYYTSSDVSLENVLLTALPASR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggagctccccaccgcggacggcgtgtctgcacctctgcctggaaggtgtgctttttac
gtggaaaagaaaaaacgatactgcaaaatgatagttggaagtggaaaagcatattgtggg
gaacatgctaatgcggaaaaggactgtgagaaaaaaagaataccatgtcctctggatcca
aaacacactgtattcgaagatcttttagcaaaacatctgaagaagtgcaactccagagag
aaacccaaacctctgttctatgtgcaagatattaatgctggaccagcgattgttgaggac
acccccaaagatgaggtacctttatcagatcgcagcaaagcagagttgaacctgctcata
aaaaaactgaagactgccgtcaaagggttcaaatgcaaacatgaagaaaatatacaatct
caccctgctctccatgaagctttgaatgatccaaggaatggggactctgcattcaaacac
ctgaagcaacaggcgtcccttttaggaaacatggaggatttgcacctgcttggacctaac
aggtgttttgttgagtttggtgcagggaaaggcaagctttcccactggatccatgtcgct
ctgaaagcctatgacgacatccatttcctgcttgtggaaagatcaagcgctcgttttaaa
gtagatggcaaacaccagaattctgataccaaatttgaaagactacaagtggatattcag
caccttgatttgcgtaaagttcctctcctccaagaaaagggacttccagtggttggagtg
ggcaaacacttgtgtggcgcagcaacagaccttgctcttcaatgcctactgggcagctca
gagactgcgccccatgggatcaaagatcagccacccagcaagcgctcaaagctccagcag
cagcctggagagtctacaggaccggagcttcagcccattcccagggtggcaggggagaca
gctgccggccaggagctgagggtggatggggtggccatcgccttgtgctgccaccaccgc
tgtgactggaggcattatgtaggcaaggagttcttcaaggagaaaggactaggtgcctct
gagttcgctgccttcctgcgcatgtcaagttgggcgacctgtggctcgagacaagcaaca
cagacctctccaccacaaggtcaaactgaccaaacatttgaggaagaggagcacgaggcg
acagaagaggctgaactagacagcttggaaggagtgttgaatgctgaggaccgtgaacac
ataggacgcctgtgcaagatgctgattgaccagggcagggttcacttcctgcagcagaag
ggatttgactcccgcctactctactacaccagctcagatgtttctctagaaaacgtgttg
ctgactgcacttcccgcctcgcggtga
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