KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367143
Entry
139367143         CDS       T10872                                 
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03440  Homologous recombination
Brite
DNA replication proteins [BR:ocla03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    139367143
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     139367143
SSDB
Other DBs
NCBI-GeneID: 139367143
NCBI-ProteinID: XP_070961319
LinkDB
Position
15:28115683..28150809
AA seq 1533 aa
MSKGDRDGFVVKFVEVNGRKTDLAVKAYEAIMALQSESYLKNIDEETALQMDRNDKSLFV
FSTFSTPAFHHCTKLGCRVVSPLVVLFCLQQQRCVPKAEQPVYNMAMADVTISCTSLDKE
ARADVMALVQLMGGRVYRDLNVSVTHLVAGEVGSKKYLVAASMGKPILLPAWVKTCWEKS
QDSLFRYTDLPIEDYLCPVLCGCTVCVTGLSTVERKKVQRLCQLHGASYTGQLKMNECTH
LIVSEPSGQKYECAQKWNVFCVSLHWLFDSIEKGFCQDESRYTVERGDQKDGKPHTSTPT
GTSKKKEESASLLGLSHISVNSSMTVNDTALTNATLSRLDTPDPIDALDITVGPADDLLD
GCKLYLCGLPGMRLEKLRRLVNMAGGLHFNQPSEELTHVVMGETDQETKTFLAKATHRPH
VVTVQWLLDSFSRGSLLSEGDYHHPACLPPAPSTMAMPAPRTSASRPSSTTSAAPLVHEP
ATPRHRKAEEDMLSQYMDDDQTVVEMPLPADSSIHRRQSSIAPEPWVSAPGQASTIAEVG
AGADTTLQEASEAGLFAGKRFLLVGFGAEAEAQLSMLVTENCGKVLVGRTRAVADYAVVP
LLGCEVEATVDEVATDTWLAMCVEQQCVLELGSHPFFSPVSVMEGRSPLRDCVLSVSQFT
GAERESLVELAKHLGASVQDYFVRMANQRRGMLASTHLVLQSPEGTKYQAAEKWGLPAVT
LRWVLESARTGRKAEEGRYLVDLPRSPEREEESFVGGSQKQSMPPPPARNKSPEIPLLGP
QSGAAVTPLDTRRFQSKVFRSVLDQGQQDKDCTTPGGQEGDRKAGGQKESPALPLDTPSR
FLCRDQLFRPTFNVKAALAALDTPGGRSQPSQKVVTPLSVVIGRNLKVALANSTRSNDPD
LQALSASPQLSKETHRAVEEEAAALTGVVICVSKKLSKKQRELNGIAASLGADFRWSCDD
TVTHYIYQGRVGDNTREYRALKERGVHVVSQHWLQACAEDQRHVSESLYPFTYNPKMSLN
LSQVPPDSSQRSPPATRTTKLRDLTEAQENRPEDNAVEDATTSHHVSGETDQEQGRDNAE
KKDLSETLEMREKLQRQLQEIMSATKKTTSRRSSARLGSGGTDSHPHTPGRNANARRTLE
ALRMSRQAAMDLNTEPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQHSESLAVPLAAP
LSYSDNAGNTLRDSMTDSEMVEMVVCDVIDQQMGERVMTVPGEEPDLLTPKAPSIAFPLA
NPPVPPEPQMDEESEAEKEPPRFQLSSLNPQERIDYSALIEELGGVVLDKQCFDPSCSHI
IVGSPLRNEKYLAAMASGKWILHRSYLEACRSVGHFIQEDAYEWGSSSILDALPSISSHQ
KRLALAAMRWRRNLQDQNNLEGAFSGWTVMLNIDQTRESGFRRLLQSGGAKVLPSPSPSL
YKGTTHLFAEFSRLKPGDFRVDVPEAMSQGVKCLKPEFIADYLIQEPSAPIEMYYLPQAA
QCLPVGADVSRTTPSYKRKVSGDSSKLKKTRLK
NT seq 4602 nt   +upstreamnt  +downstreamnt
atgtcgaaaggagatcgagatggcttcgttgtgaagtttgtagaagtcaatggacgaaag
acagaccttgctgtcaaggcctatgaggccataatggcgctccagtcagagagttatttg
aagaacattgatgaggagactgcattacagatggaccgtaatgacaagtctctatttgtc
ttcagtaccttttccactccagccttccaccactgcacaaagctgggctgtcgggtggtg
agtccactagtggtgctcttctgcctgcagcagcagcgctgtgttcccaaagcagagcag
cctgtctacaacatggccatggctgatgttaccatctcctgcaccagtctggacaaggag
gctagggctgacgtgatggctctggtacagctgatgggagggcgggtctatcgggacctt
aacgtgtctgtcactcacctagttgccggggaggtgggcagcaagaagtacctggtggcc
gccagcatggggaagcccatcttgctgcccgcctgggtcaaaacctgctgggagaaatca
caggacagcctgttcagatacactgacctgcccatagaggactacttgtgccctgtgctc
tgtggctgcaccgtctgtgtcacaggcctctccacggtggagcgtaagaaggtgcagagg
ctctgccagctgcacggggccagctacaccggacagctcaagatgaacgagtgcacccac
ctcatcgtcagcgagccctcaggtcagaagtatgagtgtgcacagaagtggaatgtcttc
tgtgtgtctctgcactggctgtttgacagcatcgagaagggcttctgccaggacgagagt
cgctacacggtggagcgaggggatcagaaagacggcaaaccccacacctccaccccgact
gggaccagcaagaagaaagaggagagtgcgtctctactgggcttgagccacatttctgtg
aacagcagcatgacggtgaatgacacggccttgaccaatgccacgctcagccggctggac
acaccagaccctatcgatgctctggacatcacagtcggccccgcagacgacttgctggac
ggctgcaagctgtacctgtgtgggctgccagggatgaggctggagaagctgcgtcgcttg
gtcaacatggccgggggcctgcacttcaaccaacccagcgaggagctcacccacgtggtc
atgggagagactgaccaggaaaccaagaccttcctggccaaagccacacacaggccccat
gtcgtgacggtgcagtggctgctggacagcttctccagaggcagcctgctctctgagggg
gactaccaccacccggcttgtctgccccccgccccttcaaccatggccatgcctgccccc
cgcacctccgcttctcgtccctcctccaccacctcggctgccccccttgtccacgaacca
gctacccctcgacacaggaaggccgaggaggacatgctctctcagtacatggatgacgac
cagacagtggtggagatgcctctaccagctgacagcagcatccacaggaggcagagctct
atagcaccagagccctgggtctcagccccaggccaggcttctactatagccgaagttggg
gccggagctgacaccaccctgcaggaggccagtgaggcgggcctatttgcggggaaacgc
ttcctcctggtgggctttggggcagaggcggaggcccagctctccatgctggtgacggag
aactgtgggaaggtcctggtggggcgcacccgggccgtggctgactacgctgtggtgccc
ctgctgggctgcgaggtggaggccactgtggacgaggtggccactgatacctggctggcc
atgtgtgtggagcagcagtgtgtgttagagctgggctcccacccctttttcagccctgtg
tcagtgatggagggccgctcccctctcagagactgtgtcctctcagtcagccagttcacc
ggggcagagagggagtccctggtagagctagccaaacacctgggagccagtgtccaggac
tactttgtgcgcatggccaatcagaggaggggcatgctggctagtacccacctggttctg
cagagcccagagggcaccaagtaccaggcggccgaaaagtgggggctacccgccgtcacc
ctgcgctgggtgctggagtctgccaggacgggccggaaggcagaagaggggcgatacctg
gtggatttgccccgttctccagagagagaagaggagagttttgtggggggttcgcagaag
caatccatgccccctcccccagcccgtaacaagtccccagagattcccctgctgggcccc
cagagcggggcggccgtcacccccctggacacgcgccgtttccagagtaaggtgttccgc
tccgtgctggaccagggccagcaagacaaggactgtaccacaccgggaggtcaagagggg
gacaggaaagcaggggggcagaaagaatccccagcgctgccgttggacaccccctcccgc
ttcctctgccgagaccagctcttcagacccaccttcaatgtcaaggctgcgttagcagcg
ttggacacaccagggggcaggtcacagccgagtcagaaggtcgtgaccccgctgtccgtg
gtcatcgggaggaacctgaaggtggccctggccaacagcacccgcagcaacgaccctgac
ctccaggccctctcagccagcccccagctcagcaaggagacacacagagcggtggaggag
gaggctgctgccctgactggtgtggtgatctgtgtgagtaagaaactgagcaagaagcag
cgggagctcaacggcatcgctgcctcattgggagctgacttcaggtggtcgtgtgacgac
accgtgacgcactacatctaccagggtcgtgtgggggacaacacgcgggagtacagggct
ttgaaggagagaggggtgcatgttgtgtcccagcactggcttcaggcgtgtgctgaggat
cagaggcacgtgtcggagtctctctacccgttcacctacaaccccaagatgagcctgaac
ctcagccaggtgcctcctgacagtagccagaggtcaccccctgccacccgcaccacaaaa
ctcagagacctcactgaggcccaagagaacaggcctgaagataatgccgtagaagacgcc
acaacctcccatcacgtcagtggagagactgatcaagagcagggccgggacaatgcagag
aagaaagacctgtcagagaccctggagatgagggagaagctccagaggcagctgcaggag
atcatgtcagccaccaagaagaccaccagcaggcgctcttcagcccgcctgggctccggg
gggactgactctcatccccatacccctggccgcaacgcaaacgcccgacgcactctggaa
gcactgcggatgtctcgtcaggcagcaatggacctgaacacagagccgtctcagagtgag
cagatcgtgtgggatgacccaacggcccgggaggagagggccaagctggctgacaacctg
caatggcctggcagcccctcccagcactctgagtccttggctgtacctctagcagcaccc
ctatcctactctgacaatgccggaaacacacttcgggactccatgaccgactctgaaatg
gtggaaatggtggtgtgtgacgtgattgaccagcagatgggtgagagagtgatgactgtg
ccaggtgaggagcctgacctcctcacccctaaagcccccagcatcgccttccccctcgcc
aacccccccgttcccccagagccacagatggatgaggagagtgaggcggagaaggagcct
cctcggttccagctctcctccctcaacccccaggagaggatagactacagcgccctcata
gaggagctggggggtgtggtgctggacaaacagtgctttgaccccagctgttcccacatc
atcgtggggagccccctgaggaatgagaagtacctggcagccatggcctctgggaagtgg
atcctgcaccgttcctacctggaggcctgtcgctccgtgggacactttatccaggaggat
gcgtacgagtggggcagtagctccatcctggatgccctaccctccatcagctcccatcag
aagaggctggcattggctgccatgcgctggaggaggaacctgcaggaccagaacaacctg
gagggagcgttcagcggttggaccgtcatgctaaacatcgaccagaccagagagtcaggg
ttcagacgactactgcagtctggtggagcaaaggttctccccagtccctctccatctctg
tacaagggaaccacgcacctgtttgcagaattcagccggttgaagccaggagacttccgg
gtggatgtgccagaagccatgtcccagggagtcaaatgtctgaagccagagttcatcgca
gattacctcattcaggagccgtctgcaccaatagagatgtactatcttcctcaagcggcc
cagtgtctgccagtgggcgcagacgtcagccgcaccaccccgtcctacaagcgcaaagta
tcaggagattcctccaagctcaagaagacccgcctcaagtga

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