Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367158
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Entry
139367158 CDS
T10872
Name
(RefSeq) transcriptional repressor NF-X1-like isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139367158
04121 Ubiquitin system [BR:
ocla04121
]
139367158
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
139367158
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
139367158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
139367158
NCBI-ProteinID:
XP_070961378
LinkDB
All DBs
Position
15:complement(28758784..28787389)
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AA seq
1123 aa
AA seq
DB search
MAEGSVTDSLDLNPDETSARQKCNQQQSRRCRNREGHNRNWSGSNNYGPAPQQQQQGHFH
HGVKRSQVHDNSTVPVNFHPPPYHQEDVSRGRGRGGRGANGGGGGRGSRGQPPRWNRPGV
DTGPPGLPRGHHGLGGGGGYRPGTPPIDGPSWRRGDPGGRSVEVGPAHEDHQDTRPEKPR
RFSQEPRREERGARSAKGPPHSLEKQENHDSHATGGGGWDPAEPREETPPSEMGARSRKG
GRAEERKPHVDAQQKFPEPKRRQGPIKEYPQGKDHERGARDIPSGHRDKLASGTEEEPSW
RSQGRGQARRTPLQDRGQRRTLNSDHRPGQKRWDNVPNKSKETQTGCLIEQLSEEKYECM
VCCEVIRVMSPVWSCHSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNV
YKCFCGKATNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPQCPASVTKACT
CGRTSQPMRCGQATAIHCDKQCGATLNCSEHTCTQVCHSGLCQPCPLQVKQVCYCGVVSR
EVLCGTDKDRFDGSGHFCCQKACGKMLDCEAHRCEQVCHPGPCKPCPRSPRLVRSCPCGQ
TALAKLLELGYPERRGCSDPIPSCGKTCSKPLPCGSSETIHICEKLCHEGSCGPCSLTST
IKCKCGSKTKDVPCAVIQNEDGLMFTCEKRCLKKRSCGRHKCGELCCVGAEHKCSLICGY
KLNCGLHRCQELCHRGNCQPCWQTSFDELACHCGVSVLFPPIACGTKPPECKNPCTRRHE
CDHPVFHNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLACNKVLLCDLHRC
RRICHRAECLAEGVCRQPCLLPRPNCGHPCNAPCHKGTSCPGSTCTAKVALQCDCGRRKE
TVVCTEAASAHQRYAAIAMASKLSDMQLGDSVDMGLITKKEMKHTKLECDEGCAALERNR
RLAEALQIDPSVDPFNMRSSSSTYSDSLRVDARKDFKFVSEIEEEIKNLVELTSKGKQSK
RSHCFPPMNREHRKLVHELAEAYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLMER
DTGVPRAPPPIAHIKQSSKADSVSSWSKAVKEEPVIDYFDVQD
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcagtcacagactctctggatttgaatccagatgagacttcagcacga
cagaaatgtaaccagcagcaatccaggaggtgtcggaacagagagggccacaaccgtaac
tggagtggttctaataattacggcccagcaccgcagcaacagcagcaaggccattttcac
catggggtcaaacgatctcaagtccatgacaattcaacggtccctgtaaatttccatcct
cctccctaccaccaagaggatgtatcaaggggtcgaggaagaggaggaagaggggctaac
ggaggtggagggggccggggctcaaggggccagcctccaaggtggaacaggcctggggtc
gacacgggcccccctggcttacctaggggccaccatggactgggtggtggtggtggctac
aggcctggaacaccccccatagacgggcctagctggcgtcgaggagaccctggcggccgg
agtgtagaggtggggcctgcccacgaagaccaccaggacacccgccctgaaaaacccaga
cggttcagccaggagccgcggagagaagagagaggtgcgaggagtgcgaaaggacctcct
cactctctggaaaagcaggagaaccacgacagccacgctacaggaggaggaggctgggac
cctgctgagcccagagaagaaaccccaccatcagaaatgggggccagaagccgaaaagga
gggagagccgaagaaaggaaaccccacgtcgacgctcaacagaaattccctgagcccaag
cgacgccaggggcctatcaaagaatatccccagggtaaggaccatgagaggggagccaga
gacatcccctctggccatcgtgataaactggcctctggcactgaagaggagcccagctgg
aggagtcaggggagaggccaggcgagacgcacccccctacaggacagaggccagaggaga
acactcaactcagaccacaggcctggacagaagaggtgggacaacgtgcccaacaagagc
aaggagactcagacaggttgcctgatcgagcagctgtctgaggagaagtatgagtgcatg
gtgtgctgtgaggtgatcagagtcatgtctccagtctggagctgccacagctgcttccac
gtcttccatctcaactgcatcaagaagtgggcccgctccccagcctcccaggcagacgaa
acaaatgatgggtggcggtgtccggcctgtcagaatgttgtcttccaacccccgaacgtc
tacaagtgcttctgtggcaaagcgaccaacccagagttccagcgtagtgagatcccacac
agctgtggagacatgtgtgggaagaagaggagcggagcagactgcaagcacccctgtaac
attttgtgtcacccaggaccttgtccccagtgtcctgcttctgtcaccaaagcatgcacc
tgcggaagaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaag
cagtgtggcgccaccctcaactgttccgaacacacctgtacccaggtgtgccacagcgga
ctgtgccagccttgcccgctacaggtcaagcaggtgtgctactgcggtgttgtgtctcgg
gaggtactctgtgggacggataaagaccgctttgatggctcaggccacttctgctgtcag
aaagcatgtggcaagatgttggactgtgaggcccaccgctgtgagcaggtgtgccaccct
gggccgtgcaagccgtgcccacgctcccccaggctagtaaggagctgcccctgtgggcag
acggccctggccaagctcctggagctgggctaccccgaacgccgcggctgctccgacccc
atcccctcctgtggcaagacctgcagcaagcctctgccctgcggctccagcgagaccatc
cacatctgtgagaagctgtgccatgagggaagctgtggtccctgctcgctcacctccacc
atcaaatgcaaatgcggctcgaagaccaaggatgttccctgtgcagtcatccagaatgaa
gatggactgatgtttacttgtgagaagcgctgcctcaaaaaacgctcctgtggccgacac
aaatgtggcgagctgtgctgtgtgggcgcggaacacaagtgctctctgatctgtggctac
aagctcaactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaaccc
tgctggcaaaccagttttgatgagctggcgtgccactgtggggtgagtgtcctgttcccc
cccatcgcctgtggcaccaagcccccagagtgtaagaacccgtgtaccaggaggcacgag
tgtgaccacccagtgttccacaactgccacagtgaggagaagtgcccaccctgtacctac
ctcactcagaagtggtgcatgggaaagcatgagcgaaggagcaacatcccgtgccacctt
caggacatctcctgtggcctggcctgcaacaaggttctgctgtgtgatctccaccgctgc
cgccgcatctgtcaccgggccgagtgtctggccgagggcgtctgccgccagccctgcctg
ctgccccggcccaactgtggccacccctgcaacgccccttgccacaagggcaccagctgc
ccgggcagcacctgcactgccaaggtggcgctacagtgcgactgcggtcggagaaaggaa
actgtggtgtgcacggaagcagccagtgcccatcagaggtatgcagccattgccatggcc
agtaagctgtctgacatgcagctgggtgactctgtagacatgggtcttatcactaagaag
gagatgaaacacaccaagttggagtgtgatgaggggtgtgctgcactggaaaggaacagg
cgattggctgaggccctgcagattgacccgtcagtggaccccttcaatatgcgctcctcc
tcctcaacgtacagtgacagcctcagagttgatgccagaaaagattttaagtttgtcagc
gagatagaagaggagatcaagaatctggttgagctgaccagcaagggtaaacagtccaaa
aggagccactgcttccccccaatgaaccgggagcacaggaagctagtccacgagctggcc
gaggcctacaacgtggagagtgtgagctacgacagcgagcccaaacgcaacgtagtcatc
accgccatcagggggaagtctgcctgtcctaactcaaccctgacctccctgatggagaga
gacactggggtcccgagggctcctccacccattgcccatatcaaacaaagcagcaaggct
gacagtgtgagcagctggtccaaggcggtcaaagaagagccggtgattgactacttcgat
gtccaggattaa
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