Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367176
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Entry
139367176 CDS
T10872
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
ocla04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139367176
09143 Cell growth and death
04217 Necroptosis
139367176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139367176
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
139367176
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Prefoldin_2
Histone_HNS_N
Big_3_3
Alpha-E
Hydantoinase_B
DUF948
DUF4041
RUBC_PIKBD
NPV_P10
FliJ
DUF848
Motif
Other DBs
NCBI-GeneID:
139367176
NCBI-ProteinID:
XP_070961411
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Position
15:29571754..29576918
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AA seq
220 aa
AA seq
DB search
MNRIFGRGKPKGPPPNLTDCIGNVDSRAESVDKKIARLDVELVKYKDQMKKMRDGPSKNM
VKQKAMRVLKQKRMYEGQRDNLTQQSFNMEQANYTIQTLKDTKTTVDAMKIGAKEMKAAY
KNVKIDQIEDLQDQLEDMMEDANEVQEAMSRSYGTPEIDDDDLEAELDALGDELLLDDDS
SYLDEASTAPSIPEGIPSDRATNRDGVLVDEFGLPQIPAT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtatttttggtcgaggaaaaccgaagggaccaccaccaaatctaacggactgt
ataggaaatgttgactcacgagcggagtctgttgacaagaagattgccagactagatgtt
gaactggtcaagtacaaggatcagatgaagaagatgagagacggtccttcaaagaacatg
gtcaagcagaaggcaatgagagtgctgaagcagaagagaatgtatgagggccagagagat
aacctcacacagcagtccttcaacatggaacaggccaactacacaatacaaactctcaaa
gacacaaaaacaacagtggatgctatgaaaattggagccaaagagatgaaggcggcatac
aagaatgtgaagatcgatcagattgaggatctccaggaccagctggaggacatgatggag
gacgccaacgaggtgcaggaggcgatgagcagaagctacgggacgccagagatcgatgac
gatgacctggaagcagagctggatgccctgggagatgagctgctgctagatgatgacagc
tcctacctggatgaggccagcactgccccctccatcccagaaggaatacccagtgacagg
gcaacaaaccgggatggagttctggtggatgaatttggactaccacagatccctgccaca
taa
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