Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367216
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Entry
139367216 CDS
T10872
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139367216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139367216
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Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
139367216
NCBI-ProteinID:
XP_070961516
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All DBs
Position
15:32192955..32244885
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AA seq
1089 aa
AA seq
DB search
MSFSFEGDFKTRPKVSLGGVCKKEEKASLLHRTQEERRKREDERRRLKNAIVIQSYIRGY
HDRKQQYAIQRGNFDRCVCQAQSEGGPPMSDAASLSLLTRQLLFFYRQSEDSRRLIWISQ
NLVKHNGQFLKLLAGPERQTCVFQIKRVLGSCCRLLQTCKDDSLNVAVPMRMLETFSAER
TYLPVLEDMNCVASLIEQILHYMVQKGYYRSLYILVNHKLPSSLEYSDAPYGAHAIPLAS
TLLEHTLKPLHFTYSSCTTGARQFVFAAFTEEFTSAPFTEQIFHFFIPALSDPRLHFPFE
AFLCSLQATVVSSAAALKRAPWLFYFVLSVGETCLGSLSEEGLQLYLRALQALLPLLPVS
ESTSRPEVISDSEDEEDTNTQAPSTQDDSYRISVQMITEECVHKLDTKQQTNALLNLVWR
DSASEEVFTMMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLIQSMTTKMITGS
MVPLLQVISRGSPMSLEDSNRIIPLFYLFSSLFNHSLISVHDSEFFGYPMEGHGHSNTTM
MPFTLSELVNLSQLLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTEVQQRIQAE
QKRWVQLFKVITNLVKMVKARDIRRPFCPAGHWLSEEVNIRADKVTQLYVPSARHVWRTR
RMGRIGPLQSTLDVGMEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQ
GDGPLLDGIIVTIRRNYIYEDAYDKLSPDNEPDLKKRVRVHLLNAHGLDEAGIDGGGIFR
EFLNELLKSGFNPNQGFFKTTNEGLLYPSPTAQMLVGDSFARHYYFLGRILGKALYENML
VELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEDDVEDLGLNFTIVNNDL
GEAQVVELKPGGKDIPVSTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRM
FDQQEIQVLISGAHVPICLDDLKTFTNYSGGYTATHPVITIFWEVVESFTDEEKRKLLKF
VTSCSRPPLLGFKELYPAFCIHNGGNDLERLPTASTCMNLLKLPEFCDQHLMRNKLLYAI
ESSAGFELS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagctttgagggagatttcaaaacaagacccaaggtatctcttgggggagtg
tgtaaaaaggaggaaaaagcatctcttctacaccggacacaagaggaaaggcgaaaaaga
gaggatgaaagacgaagattgaagaacgctattgtcattcagtcctatatacgaggatac
catgaccgaaaacagcaatatgccatccagaggggcaactttgaccgctgcgtctgccag
gcacagtcagaaggtggaccgccaatgtccgacgctgccagtcttagtctcctaacgagg
caactcctttttttctacagacagagtgaggattcacggagattgatatggatttctcag
aacctagtgaaacacaatgggcagtttttgaagctgctggcagggcccgagagacagacg
tgtgtgtttcagatcaagagggtcctgggctcctgctgcagacttctgcagacctgcaag
gatgacagtttgaatgttgccgtccccatgaggatgctggagaccttttctgcagagaga
acttatcttcctgtccttgaagacatgaattgtgtagcgtcgttaatcgagcagattttg
cactatatggtacagaaaggatactacaggtcactttatattctagtgaatcacaagctc
ccttccagtctggagtacagcgatgctccctatggtgcacacgctatccccttggcaagc
acactgctggagcacacgctgaagcccctgcactttacctactcctcctgcactacaggc
gcaaggcagtttgtgtttgcggctttcactgaggagttcacctcggcgcctttcacagag
cagatctttcatttctttattccggcgttgtccgatccgcgcctccacttccccttcgag
gccttcctgtgctccctgcaggccaccgtagtctcctccgcagcggcgctgaaacgtgcg
ccgtggctcttctactttgtcctctcggtcggggagacctgcctgggttcattgtcagag
gagggcctccagctatacctgcgagctctgcaggccctcctgcctctcctccccgtgtca
gagagcaccagcaggccggaggtcatcagtgactctgaggatgaggaggacaccaacacc
caggctccgtccacacaggacgacagctatcggatatcggtgcagatgatcacggaggag
tgcgtccacaagctggacacaaagcagcagacgaacgcgctgctcaacctggtgtggagg
gactcggccagcgaggaggtcttcaccatgatggcctccatctgccacacactcatggtg
cagcaccgcatgatggtgcccaaagtcaggcttctgtacagtttagcgtttaatgcacgt
ttcctgagacatctctggcacctgatacagtccatgaccaccaaaatgatcacggggtcc
atggttccgctgttgcaggtcatttcacgggggtctcccatgtccctggaagactccaat
cgcatcattcccctcttctatctcttcagttccctcttcaaccactcgctcatctccgtg
cacgacagcgagttctttggctaccctatggagggccatggccacagcaataccaccatg
atgccgttcacattgtccgagctggtgaacctgtctcagttgctgagggacgcgtgtctg
ggcatcatcaagctggcctaccccgagaccaagacggagcaccgcgaggagtacatggcc
gccttccgcagcgtgggggtcaaaaccaacacagaggtgcagcagcgcatccaggccgag
cagaaacgctgggttcagctcttcaaggtgatcactaacttggtgaagatggtgaaggct
cgtgacatcagacgtcccttctgtccggcaggtcattggctctctgaagaggtcaacatc
agagcagataaggtgacccagctgtacgtcccctcggccagacacgtgtggaggacgcgg
aggatgggacgcatcgggcccctgcagtccacactggatgtggggatggagcctccacag
ctgtctgtttctgaggagagacacttggccattctgaccgagctgcccttcgtcgtgccc
tttgaggaacgagtcaagatcttccagagattgatctacgcggacaagcgggacgtacag
ggagacgggccgcttctggacgggatcatcgtcaccatcagacggaactacatctacgag
gacgcctacgacaagctctccccagataacgagccggacctgaagaaacgtgtccgggtg
cacctactcaacgcccacggtctggacgaggcgggtatcgacggcgggggcatcttccgc
gaattcctcaacgagctgctcaagtcgggcttcaaccccaaccagggctttttcaagacc
accaacgagggcctgctttatcctagccccaccgcccagatgctagtgggggactccttc
gccagacactactacttcctgggacggatactggggaaggccctgtatgagaacatgctg
gtggagctgccgtttgccagctttttcctgtccaagctgctgggcaccagtgctgacgtg
gacatccaccacctggcctcgctggaccccgagatgtaccgcaacctgctcttcctcaag
agctacgaggacgacgtggaggacctgggactcaacttcaccatcgtcaacaatgacctg
ggagaggcacaggtggttgagctgaagcctggagggaaggacatccctgtgtccacggcc
aacaggatagcgtatatccatttagtggcagattaccgactcaacaaacagatcaggccc
cactgcctggccttcagacagggcctggccaatgtggtcaacctggagtggctgcgtatg
tttgaccagcaggagatccaggtgttgatatctggagctcatgtacccatttgtcttgac
gacctgaagacgtttacaaactactcaggtggttacactgccactcaccctgtcattacc
atcttctgggaggtggtggaaagcttcaccgatgaagagaaacgcaagctgctcaagttt
gtcaccagttgctcgcggcctcccctcctgggcttcaaggagctgtacccagccttctgc
atccataacggggggaacgacctggagcgcctgcccacggcctccacctgcatgaacctg
ctcaagctgcccgagttctgcgaccagcacctgatgaggaacaagttgctgtacgccatc
gagtcctccgcaggcttcgagctcagttga
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