Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367227
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Entry
139367227 CDS
T10872
Name
(RefSeq) tubulin, beta 6 class V isoform X1
KO
K07375
tubulin beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139367227
09144 Cellular community - eukaryotes
04540 Gap junction
139367227
09142 Cell motility
04814 Motor proteins
139367227
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139367227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139367227
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139367227
04147 Exosome [BR:
ocla04147
]
139367227
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139367227
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139367227
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139367227
Exosomal proteins of colorectal cancer cells
139367227
Exosomal proteins of bladder cancer cells
139367227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
139367227
NCBI-ProteinID:
XP_070961547
LinkDB
All DBs
Position
15:complement(33270490..33283712)
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AA seq
453 aa
AA seq
DB search
MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGNYVGDSSLQIDRISVYYNEASAHKYV
PRAILVDLEPGTMDSVRSGSFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMM
AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIAPRG
LKMASTFIGNSTAIQELFKRFSEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQEATANDGEETFDDEEEELNEEWNLEAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatagttcacatacaagccggacaatgtgggaatcagattggcaccaagttt
tgggaagttatcagcgatgaacacggcatcgatccggcaggaaactatgtgggtgactca
tcgcttcaaatcgacaggattagtgtgtactacaacgaagcgtccgcacacaagtatgtc
cccagagcaatccttgtggacctggaacctgggaccatggacagtgtccggtcggggtct
tttggacagctattcagacctgacaactttatctttgggcagacgggtgcggggaacaac
tgggccaagggccactacactgagggagcagagctggtagactctgtgctggatgtggtg
aggaaggagtgtgagcactgtgactgtctccagggcttccagctcacccactccctgggt
gggggcacgggctcaggcatgggcaccctgctcatcagcaagatccgtgaggagtacccc
gaccgcatcatgaacacgttcagcgtcatgccctcacccaaggtgtctgatacggtggtc
gaaccgtacaacgccacgctctctgtgcaccagctggtggagaacacggatgagacatat
tgcattgacaacgaggcactctacgacatctgcttccgtaccctaaaactgaccacaccc
acttacggagacctcaaccacctggtgtcggccaccatgagcggtgtgaccacctcactg
cgcttccctggccagctcaacgccgaccttcgcaaactggccgtcaacatggtgcccttt
ccccgcctacatttcttcatgcctggctttgcaccactaaccgccagggggagccagcag
tatcgcgccctgacagtgcccgaactcactcagcaaatgtttgacgcccgcaacatgatg
gcagcttgcgacccgcgccatggccgctacctcaccgtggccactgttttccgagggccc
atgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaacagcagctac
ttcgtggagtggatccccaacaacgtcaaggtggccgtgtgtgacattgcgccccgcggc
cttaagatggcctccacattcatcggcaacagcacggccatccaggagctgttcaagcgc
ttctcggagcagttctcggccatgttccgccgcaaggccttcttgcactggttcaccggg
gagggcatggacgagatggagttcacagaggccgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggaggccacggctaatgacggggaagagacattcgacgacgag
gaagaagaactcaatgaggaatggaaccttgaagcccaatag
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