Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367302
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Entry
139367302 CDS
T10872
Name
(RefSeq) transforming growth factor beta-2 proprotein-like isoform X1
KO
K13376
transforming growth factor beta-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04068
FoxO signaling pathway
ocla04110
Cell cycle
ocla04218
Cellular senescence
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139367302
04350 TGF-beta signaling pathway
139367302
04068 FoxO signaling pathway
139367302
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139367302
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139367302
04218 Cellular senescence
139367302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139367302
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139367302
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139367302
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Growth factors/receptors
139367302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Beta-prop_RIG_2nd
CBM96
Motif
Other DBs
NCBI-GeneID:
139367302
NCBI-ProteinID:
XP_070961629
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Position
2:complement(36174598..36201206)
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AA seq
411 aa
AA seq
DB search
MNYCVLSLLLTLDLATVAVSLSTCSTLDMDQFMKKRIEAIRGQILSKLKLTSPPETYPKP
EEVSRDIIAIYNSTRDLLQEKANERAATCERQRSEEEYYAKEVHKIDMQPPYPSENVISP
THYNPYYRRLTFDVTSMEKNASNLVKAELRVFRLQNTKARVSEQRIELYQILSHKDLASP
TQRYIDSKVVRTRMEGEWLSFDVTEAVSEWLLHRDRNSGFKISLHCPCCTFVPSNNYIIP
NKSEELETRFAGIDDSFHHSGDLKVYRKRRHSAQAPHLLMMLLPSYRLESQHKSHRSKRA
LDAAFCSRNVQDNCCLRSLYIDFKKDLGWRWIHEPKGYNANFCAGACPYLWSADTQHSKV
LGLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcgttttaagtcttctcctgaccttggatttagccactgtggccgtcagt
ttgtctacatgcagtacactggacatggatcagtttatgaaaaagcgcatagaagccatc
cggggacagatactgagcaagctgaagctcaccagccccccggagacataccccaaaccc
gaggaggtgtcgcgggatatcatcgccatctataacagcacgagggacctgttgcaggag
aaagccaacgaacgggcagcaacgtgtgagcgccaacgaagcgaggaggagtactatgca
aaagaggttcacaaaatcgacatgcaacccccctacccctctgagaatgtcatctctccc
acgcactacaacccgtactacagacggctcaccttcgacgtgacctccatggagaagaat
gcctctaacctggtcaaggctgagctacgcgtcttccgcctccagaacaccaaggcccgc
gtgtctgaacagaggattgagctgtaccagattttaagtcacaaggacctggcttccccg
acgcagcgctacatcgacagcaaggtggtgcgcacgcgcatggaaggggagtggctgtct
tttgatgtgacagaggcagtcagtgaatggttgcttcacagagacagaaacagtggattc
aagatcagcttgcactgtccgtgctgcacgtttgttccctcaaacaactacatcatcccc
aataagagtgaggagctggaaacccgctttgcaggtatagatgacagcttccaccacagc
ggagacctgaaggtgtataggaaacggcgccacagcgcccaggctccacacctgctcatg
atgctgctgccctcctaccgcctagagtcccagcacaagagccaccgctccaaacgagcc
ctggacgctgccttctgctccagaaacgtccaggataactgctgcttgcggtcgctctac
atcgacttcaagaaggatctgggctggaggtggatccacgagcccaagggttacaacgct
aacttctgcgccggggcctgtccctatctatggagcgccgacacccagcattccaaggtg
ctaggtctgtacaacaccatcaacccggaggcgtcagcatcgccctgctgtgtgtctcag
gatctggaacctctcaccatcctctactacatcggcaagacccccaagatagagcagctc
tccaacatgatcgtcaagtcctgcaagtgcagctag
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