Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367377
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Entry
139367377 CDS
T10872
Name
(RefSeq) triadin-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139367377
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
139367377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
139367377
NCBI-ProteinID:
XP_070961675
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Position
2:36625755..36654924
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AA seq
794 aa
AA seq
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MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKSFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNKMKNGVDSNKSTGSPVRSPLEKDTSHKRL
DVSDSEPESEKEEYSDKRQKEKYNVERKKDERAVDLKKERYTEAFKNKRHAEQSKNGKHT
EDARKERHVEHLEEPKKERHFEKSRKERHVHDTKNERHVQEPKKESNLEGPKNESHTDEP
RKERHTEERRKEIPMYEPPQERPVENHRQGFERRSVLDDLYPSCYSPPRPPRPPRLPPPV
RRMSGEVNKGVKKEVKKERERRDSSDTLSPSHPRPTPPSRRPSVKVKKERKKAPPDPNSP
LPPLHPHPSMPTAAEVKKESNLQAVMKKKEPPWISVVRKEPPDPNAPFAPLPLHLHPPPH
VKRPSVEVKKEREESSDYKPVSLKVTSSDHVKKDRKDSDSKVPKITSVDAKKERKDLSDS
KPKPAKRQNLDSSDSKPKPAKRQSLDSSDSNPKRSKRPSLDGKKDRKDSTDSKPSHSVKR
HSTDSKSDRRDSVDSKTSNSPSAKKLSSETKEFPSSKSSHPGPLQRKSSTDSIERRGKPE
MPKIPTTPTSPMSPSFSSAGVPLSPCLATGETIRDKCIEMLAAALRTDDNFKEFGTNCDS
MAAEIEDHIYTEMGSTDMKYKNRVRSRISNLKDPKNPGLRRNVLAGGIELRRFAIMSAEE
MASDELKQLRNNLTKEAIREHQLSKTSGTISDLFQCSKCGKKNCTYNQMQTRSADEPMTT
FVLCNECGNRWKFC
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaggagttaattcggattgcaaaaaagctggacaagatggtgtctaga
aataacacggagggtgccctggacctgctgaatgaactgaagagcttcaacatgacactg
aaacttctgcaggaaacgagaatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtagtttccctggccaagatcctcatcaaggactggaagagactgctggat
gctgcacgtactcagagtactgagaggcccaataagatgaagaatggggttgactccaac
aaatccacagggtccccagtcaggtcccccttagagaaagacaccagtcacaagaggctg
gatgtttctgattcagaacctgaatctgaaaaggaagaatactctgacaaacggcaaaaa
gagaagtacaatgttgaacgcaaaaaagacgagagagctgttgaccttaaaaaggagcga
tatacagaggcattcaaaaacaaacggcatgcagaacaatccaaaaatggaaaacataca
gaagatgccagaaaagaaagacatgtagaacacttagaagaacccaaaaaggagagacac
ttcgaaaaatccagaaaagaaagacatgtacatgacacaaaaaatgaaagacatgtgcaa
gaacccaagaaagaaagtaacctcgaagggcccaaaaatgagagccacaccgatgaaccg
agaaaggaaagacacacagaggaacgcagaaaggagataccaatgtacgaacccccacaa
gagagacctgttgaaaaccacagacaagggtttgagaggagaagcgtcttggatgatctt
tacccctcttgttactctcctcctcgccccccccgaccaccccgtcttcctccccctgtc
agacgtatgtctggggaggtgaataaaggggtgaaaaaagaggtgaagaaagagagagag
aggagagattcttcagacactctgtctccttctcatcctcgtcccacccctccgtccaga
cgtccctcagtgaaggtgaagaaagagaggaaaaaagctcctcctgaccctaattccccg
cttcctcctcttcatcctcatccttctatgcccactgcagcagaggtcaagaaggagagc
aacctgcaagcagtgatgaaaaaaaaagagcctccgtggatttctgtggttagaaaagag
cctccggaccccaatgctccatttgctcctcttcctctccatctccatcctccccctcat
gtgaagcgcccgtcagtggaagtcaaaaaggagagagaagagtcgtcagattacaaaccc
gtttctctgaaggtgacgtcttctgaccatgtgaaaaaggatagaaaagactctgatagc
aaagtgcccaaaataacatctgttgatgccaagaaagaaagaaaggatttgtcagattcc
aaaccaaaacctgctaaaaggcagaatctggactcctcagattccaaaccaaaacctgct
aaaaggcagagtctggactcctcagattccaatccaaaacgttctaaaaggccaagtctg
gatggcaagaaagacagaaaggactccactgactccaagcccagccattctgtgaaacgt
cattcgactgattccaaatcagacaggagggactctgtggattccaagactagcaactca
ccctcggctaagaagctctctagcgagacgaaagaatttcctagctccaagtcctctcac
cctggtcctctgcagagaaagtcctcaacggacagtattgaacggagagggaaaccagag
atgccaaagattcccaccacccccaccagtcccatgtccccctccttcagctcagcaggg
gttcccctgtccccttgccttgccactggagaaaccatcagggacaagtgcatcgagatg
ctggctgccgctctacgtacagatgacaacttcaaagaatttgggacaaactgtgactcc
atggcagcagagattgaagatcatatttacacggagatgggatccacagatatgaagtat
aaaaacagggtgcggagccgcatcagcaacctgaaggaccccaaaaaccctggactgcgg
aggaacgtcctggctggaggcatcgagctgaggcgcttcgccatcatgtctgctgaggag
atggctagtgatgagctgaagcagctgaggaacaatctgactaaggaggccattagggaa
caccaactgtccaaaaccagcggtaccatttctgacctgtttcagtgcagcaagtgcggc
aaaaagaactgcacctacaaccagatgcagacccgcagcgctgatgagcctatgactact
tttgttctgtgtaacgagtgcgggaaccgctggaagttctgctga
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