Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367420
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Entry
139367420 CDS
T10872
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139367420
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139367420
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Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
ig
Ig_VEGFR-1-like_5th
Ig_2
fn3
Fn3_ROS1
VEGFR1-3_N_Ig-like
V-set
LRR_EndoS
LRR_14
DUF5625
Motif
Other DBs
NCBI-GeneID:
139367420
NCBI-ProteinID:
XP_070961728
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All DBs
Position
16:complement(6879519..6883640)
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AA seq
582 aa
AA seq
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MAATLYSVLTIALLFCRVTPGSTSCLPGCSCTNDNLGRSLLCMETAMGRIPDNVPNDFSK
IRIENSHLTELPRGSFSKVSALVSLWLNFNDITLMNIKSLEGLTNLTELRLQGNKLRSVP
WTAFQDTPNLKILDLKHNRLDVLPESALRQLPGLTYLDLSFNQLTVISRDVFLNWPLLNT
QERKGGTEPSSGEANVVLALHDNPWLCDCRLKGFVEFIKSVSPPLILMNSYLMCTGPSSR
AGKFFHEVGLKTCMKPEASASESNMTVSLGDKVILRCLVKARPDPAIHWSYSLKIIRGFT
VSETRVDDETIRSQLVIPSLHLADRGAYTCFANNFIGNSSVSVLVNIKSFNASSSSVGAA
MSLPPFPLASADENVYIDIRISKQTVYGITLEWYAATDNPAETWFTIHLGKYHSDKKELT
YIGPGINTYSVNDLLPVTKYEVCVTLKNQMPRAGQCIVFVTGSDISQLEQREKLIHIIVI
VCAMVLAVPVGMYACTTDTRCKFSCLDRCTEQCKRRRRQEKTLRTNGERQGTFDSLQAAS
DEGLCGDSEEVMKKRSKSSDEKNNHRGKAQDLPETTTGAKLY
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccttgtattcagttttaactatagcgttgctattctgtcgagttactcct
ggatcaacatcttgtttacccggctgctcttgcacaaatgacaacttgggaagatcccta
ctttgcatggaaacagccatgggacgaatcccagacaatgttccaaatgatttcagtaaa
attcgaatagagaattctcatctgaccgaattaccccgcggctccttctctaaagttagt
gccttggtgtctctgtggttgaatttcaacgacatcaccctaatgaacatcaagagtctg
gaggggctgacgaatctaaccgaactacggctacaggggaacaagctgcgttcagtccca
tggacagcgttccaggatacgccgaacctgaagattttggacctgaaacataaccgacta
gacgtgctcccggaatctgccctgagacaacttccaggcctgacctatttagacttatcc
ttcaatcagcttactgtcatatccagggatgtcttcctcaactggcctctcctcaacact
caggagagaaaaggaggtacagagcccagcagtggagaggccaacgttgttttagcgctg
cacgacaacccttggctgtgtgactgccgcctcaaaggtttcgtagagtttatcaaaagt
gttagtccgcctctaattctgatgaactcgtacctgatgtgcacgggccccagttccaga
gcgggaaagttcttccacgaagtcggtttgaaaacatgtatgaagcccgaggcctcggcc
tcagaaagcaacatgacggtgtccctgggggacaaggtaatcctccggtgcttagtcaaa
gccaggcctgaccccgccatccactggtcatacagcctgaagattatacggggatttact
gtctcagagacccgtgtggacgatgagaccatcagatctcagctggtcatcccatccctt
cacctggcggaccgaggcgcttacacctgcttcgccaacaacttcataggcaactcctcc
gtcagtgtcctggtcaacatcaagtctttcaacgcatcctcctcctccgtcggtgccgcc
atgtctctgcccccgttccccctggcctcagccgacgagaacgtctacattgacatacgc
atctccaagcagacggtctacggcatcactctggagtggtacgcggcgacggacaaccct
gcagagacctggttcaccatccacttggggaaataccactctgacaaaaaggagttgaca
tacatcgggccgggcatcaacacctattcggtcaacgacctcctaccggttactaaatac
gaggtgtgtgtaacgctgaagaaccagatgccccgcgccggccagtgcatcgtgtttgta
acaggaagtgacatcagtcagctggaacaacgggagaagctcatccatattatcgtaatc
gtgtgcgccatggtgctggcggtgcccgtggggatgtacgcctgcaccaccgacaccaga
tgtaagttcagctgcctggaccgctgtacggagcagtgtaagaggaggaggaggcaggag
aagaccctgaggaccaatggggagagacaggggaccttcgacagcctccaggccgccagc
gatgaaggactctgtggagactctgaagaggtgatgaagaagaggagtaagtcctcagac
gaaaaaaacaaccacaggggaaaagcacaagatctaccagagacaaccactggagcaaag
ctatattag
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