Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367480
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Entry
139367480 CDS
T10872
Name
(RefSeq) TANK-binding kinase 1-binding protein 1-like
KO
K12652
TANK-binding kinase 1-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139367480
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GFIT
Motif
Pfam:
TBD
Zn-C2H2_12
Cep57_CLD_2
Fib_alpha
KIF21A_2nd
DUF745
Motif
Other DBs
NCBI-GeneID:
139367480
NCBI-ProteinID:
XP_070961806
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Position
16:17354502..17423948
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AA seq
639 aa
AA seq
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MESLFGGELRLLGGGEGLKEDGCGDVGWSSSPLPEDMYSASHFTLITAYQDIKTRLAGLE
RENSGIKRKLKIYEIKFPMISEFGEDRNSYCSFESKENALLQSENGNLQQRVNALTHEAQ
KRKEREEQLEDVIQAYEKIHMEKSNLQRDLDKMTSLVEKHVERILGLESALRQRDNSLQK
FNTQLHSKDIQYLQLHSPDNHMLDCPALTLQNSRSLDTLSDLKLQRLEAELEGARHQAQG
ACQREQEVKAECERLQEELKQIQNNHIEREMTSSCEQCDVEWIKKVGDEQVNLALAYTEL
TEELGRLQKLSSKQKEILKKTSQEHHSPVQRQSHPPSPIHHQRHSPVPQRHSPIPPQHHS
PIPQRRSPVLQPQRLSPDMHRRSPLLEINDGPASYSCRPASHHLRASFQGRRSYSEVADP
SAYQRPLRLSLDPVSTLPKPRPYRDSSYSKQHQQHQHGGSQHGGSPHRGGQLRGSQSGLQ
RAGSEVGLHESSRHSRELPFPLSEVSPRSHLHFEPPPPPTPPPQLPQSSEDEEEWTCPHP
ISPPRTLGVPNNVSPHGVMRGPASCSPFPIPSRPNTLTCHPSSYLHTEHAQSWPSINLWM
ETEESDMRSCPLCQLIFPIGYPDDALIKHIDSHLENSKI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctattcggcggtgagcttaggctgctgggaggtggcgagggcttaaaagag
gacggctgtggtgacgtgggctggtcctcctcacccctccctgaagacatgtactctgcc
tcccacttcacactcatcaccgcctaccaggacatcaagacacggctggcgggcctggag
agagagaacagcggcattaagaggaagctcaagatatatgagatcaagttcccaatgatc
agtgagtttggggaggacaggaactcctactgcagctttgagtccaaggagaatgccctg
ctgcagtcagagaacggcaacctgcaacagagagtcaacgccctcactcacgaggcccag
aagaggaaggagcgtgaggagcagctggaggatgttattcaggcctatgagaaaatccac
atggagaagagcaacctccagagagacctggacaagatgaccagcctagtggagaaacac
gtagagcgaatcctaggtctggagtctgctctgagacagagggacaactcgctacagaag
ttcaacacccagctacacagcaaggacatccaatacctgcagctgcacagcccagacaat
cacatgctggactgtcctgcgctgaccctacagaactctcgtagtctagacactctgtcc
gacctgaagctgcagcgtctggaggcggagctagagggggcgcggcaccaggcccaaggg
gcgtgtcagagggaacaggaagtgaaggccgagtgtgagagactgcaggaagagctgaaa
cagatccagaacaaccacatagagagggaaatgacttcgtcgtgtgagcagtgtgatgtg
gagtggatcaagaaggtgggagatgagcaggtgaatttggcactagcctacacagagcta
actgaggagttgggacgtctgcagaaactgagctccaaacagaaagagatcctgaagaag
acctcccaggagcatcatagcccagtccaacgccaatcccaccccccatctcccattcat
caccaacgccactcccctgtgccccagcgccactcccccatcccgccccagcaccactct
cccatcccccagcgtcgctctccagttctccagccacagcgcctctccccggacatgcac
cgacgctcgcccctgctggaaatcaatgatgggcccgcctcctactcctgccggccagcc
agccaccacctgagggctagcttccagggccgtcgcagctactctgaggtcgctgaccct
tcggcctaccagcggccgctgcgcctcagcctggaccccgtgtccaccctgcccaagccc
aggccctacagggactccagctactccaagcagcatcagcagcaccagcatggaggctcc
cagcatggggggtccccccacagaggaggccagctccgaggttcccagtctgggctgcag
agggccggcagcgaggtgggcctccacgaaagttcccgccactctcgagagctgcccttc
cccctgtccgaggtctctcccaggtctcacctgcactttgagcccccgccaccccccact
ccccccccccagctgccgcagtcctctgaagacgaggaggagtggacctgcccgcacccc
atcagccccccacggacgctgggcgtgcccaacaatgtgtcgcctcatggggtcatgagg
gggccggcgtcctgctcgcccttccccatcccctccagacccaacaccctgacctgccac
ccgtcaagttacctgcacacagagcacgcccagtcctggccctccatcaatctgtggatg
gagacagaagagagtgacatgaggagctgccctctgtgccagctcatcttccccattggt
taccctgatgacgccctcatcaagcacatcgactcgcaccttgagaacagcaagatctga
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