Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367589
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Entry
139367589 CDS
T10872
Name
(RefSeq) transcription factor HIVEP3-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139367589
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139367589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
NOA36
zf-C2H2_16
zf-H2C2_5
zf-met
Motif
Other DBs
NCBI-GeneID:
139367589
NCBI-ProteinID:
XP_070961953
LinkDB
All DBs
Position
2:complement(36812280..36884568)
Genome browser
AA seq
1990 aa
AA seq
DB search
MEAEHSHPADGERSGRKQQPLSAEAAESPTGSRPPQPQQPPSNPCPVHVGQGRLHHRKPK
RSDLLLRLQHQHKTQAAAWQLSTDTPGPSGGSISSPSTSSLQSSSTQGHNTQGVQSQPSQ
EAPEGSPSKRGERKPQKLGKYVCTYCGRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKT
KSNLYKHRKSHAHRIKAGLVSSRDELSLSGPAMSAPGEDPEEPTEGESTDSEEESGQYRK
ERLSKQKSSSSLALLEQEEGQSSDNSQAVKQRLAMRLSERKRGPVASPEDPPSSSTSSSL
GLSSKGSQESGYFSLSRSTEMSRADSQVSPPTAKTYAEIILGKYGRLGGQRGPHQHHAHS
SSPGMEEKSSMPFSMPKTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRKSSLELPK
FSCPKDPYMFEPKGESPSPSMAGQSFFPHVQDVDLSGVQKSSSSVPLLRSHSMPTSAGQG
NHSTTYPWGFCRLSHSVDEQQAVVAEMRVGGQHRLLRRQPAIEMPLGAELSLEEAGPSYT
VTESGLTRKQQQQQRKCPRLYECKACGVRCKQRESYEAHRGLCTGQPIKELERGEVDGAC
RDDRPQMMHYKFRALAMAVRKRRKEESLEEDPPSPGPTVVVTCSHAITTAVPSLVEQSEA
FSGALSQAELQQQDRKGISVIQHTSSFEKQESMSMESQESMGLRESQSTLQKQPQPKSSP
SMSRLVRQHNIQVPEILVTVEPDADMVSVSPTVTASSSKEPERVVEEFQWPQRSQSMAQL
PSEKLPPKKKRLRLAEAAAQSSGESSFESVSLGPRSPSQESNISHSPSQSASFEDMGEKP
AEPSPWGSSCTQGSHMLAVPSGPHQQYQPQREMRRSASEQAPASPQHTDEVVETRSKSFD
YGSLSLQQSASAWRERRKCLLVKHATLGEPDHEEGAVASHSGRPGSPKPSPSYTSHLALH
PAEASTSRLSPEAIGKTVQLFHQPRIPPFPMQPTGHDRFPLGQVAQLHPVTTAISDVLST
HIIHRTFLHKHPSPPTIQVHPGQLHVAECLGLPLHPFSALLSLQNPTGAGETVYLPVSPG
LTIQVPTQPPIPSTVVLPSPSPQSLVPLPCLYPPPVIATCLAQLTPVVSLVVPVRLQTHM
TTYASALYTTLSQILASARSQEPICCMAMVIMGQLEQDKLQRSYLKIPTPDFKSYLPLSL
PLELGSVSREGYGPLGAGGSKRMLSPAASLELSTEAQRQQKRVKEEEEEEEKVGEEEENR
GTGGEPEAGEDEEKEPEKAQIGVVTVKVEEEEKVRDPEGHREEREIQGKAEPKKEKRGEE
NASQGVSASFVPQSPERAKAPSYTSLHTTTSVSWCYLNYVKPNPSAQRESQTSVYTSWSV
SMYNPNLPGLSTKLALSLLSSKQKHSSETYTMATALTPATGKVVSASSRKTYISEVHAIP
PSTPVEVKEPPQQPETKGKREEQGPSTSKQSEPLRVQIFEGGYKSNEEYVYVRGRGRGKY
VCGECGIRCKKPSMLRKHIRTHTDLRPYICKHCNFAFKTKGNLTKHMKSKAHGKKCQSMG
TSGSSLDEPETEEAGGIEEHLSGSEDQDEHQFSDVDDSEEDDDEEEEESSSCSSNCSLSA
RGHSSSRRQSQQGTPDPSAPEPQPDPSPSAPEPQPDPSPCPSHDLSPTRRLWPSGHASSP
KSRRALFSRRGLDASPRAFSPSSESCSPIQSLSPRRELASHNRHLSPSPKRGPSPIRALS
PLNPMALSPLRPMSPSQYRVVWARASPSPLGVQHRPRSSPSRLPWDIPSTMASDRRQVGS
MERIGTPSEGQIGPEPCLSFPPAFRLSPRDSPKAQSMDRIFSHLPLHSQQARVPYLMIPI
GGIQMVQARPRSHPTTPTSASSPPMEGLLLGQTRREAHWCRTPRTQGLRTPEDHWSDSQE
VVGASQSGLCIPSLTPPIRSKPSTSQQGRMDPGMINTKQYDSSHSSSHSHRSEAETRERW
PSHGQAGPSP
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcacagccatcctgctgatggtgagcgatccggaaggaaacagcagcct
ctgtctgctgaggccgctgagtcccccacagggtcccgtccacctcagccacagcagccg
ccatccaacccctgccctgtccacgttggccagggacgcctccaccaccgcaagcccaag
cgtagcgacctgctcctcaggcttcagcatcagcacaagacccaagcagcagcatggcag
ctctcaacagataccccaggtccttcaggaggcagcatctcctccccctccacctcatcc
ctacaatcctcctctacccaaggccacaatactcagggggtccagtcccagcccagtcag
gaagccccagagggcagcccgtctaaaagaggtgagaggaagccccagaaactggggaag
tatgtgtgcacttactgcggccgtccatgtgccaaacccagcgttctccagaaacacatc
cgctctcacacaggggagaggccttacccctgcatcccctgtggcttctccttcaagacc
aagagtaacctgtacaagcaccgcaagtcccacgcccaccgaatcaaggcaggcctggtg
tccagccgggatgagctgagcctgagcggacctgcgatgagcgccccgggagaggatccc
gaggagcctacagagggggagagcacagactctgaggaggagtcgggtcagtacaggaag
gagaggttgagcaagcagaagagtagcagcagtttggcactgttagagcaagaagagggc
cagagttctgacaactcccaggccgtgaagcagagactggccatgaggctgagtgagagg
aagcgtggccccgtggcctccccagaagaccctccctcctcctccacctcctcctcactg
ggcctcagcagtaaaggcagccaagagtcaggctacttctccctttcgaggagcactgag
atgagccgagctgactcccaggtgagccctccgaccgccaaaacgtatgccgagatcatc
ttgggcaagtatggacggcttggagggcagcgcggtccccatcagcaccacgcccactct
tcttcaccagggatggaggagaagagcagcatgccctttagcatgcccaagacgcaggtc
attgagcacatcaccaaactcatcaccattaacgaggcggtagtggacaccagcgagatc
gacagcgtcaagcccaggcgctcctcactctccaggaagagtagtctggaattacccaag
ttctcctgccccaaagacccctatatgtttgagcctaagggagaaagcccaagccccagt
atggcaggccaatcattctttccccatgtccaagacgtggacctatctggggtccagaag
tcttcctcctcagtgcctctgctgagaagccactcaatgcccacctcagcaggccaggga
aaccactccaccacctatccctggggcttctgtcgtctgagccactccgttgatgagcag
caggccgtggtggctgagatgagggtgggcgggcagcaccgtttgctgaggcgccagccc
gccatcgagatgcccctcggggctgaactcagcctggaggaggctggcccctcctacaca
gtaacagaaagtggcctaaccaggaagcagcaacagcagcaacgcaaatgtccaaggctc
tatgagtgcaaggcctgcggagtccgctgtaaacaaagggagagttacgaggcccacagg
ggtctttgcacaggccagccaataaaggagctggagagaggagaggtggatggggcgtgc
cgggatgaccgtccccagatgatgcactataaattccgagcactggccatggcagtgagg
aagaggaggaaagaggagagtctggaggaggatcctcctagccctgggcctacagttgtt
gtgacctgcagccacgcaatcaccactgcagtgccaagcctggtggagcagagtgaggcc
ttttcaggtgctctctcacaggctgagctgcagcagcaagacaggaagggcatctctgtc
atccagcacaccagctccttcgagaagcaggaaagtatgtccatggagagccaggagtct
atggggctcagagagagccagtcaacactgcaaaaacagccgcagccaaaatcatcaccc
tccatgtcccgcctggtccgccagcacaacatccaagtgccagagatcctagtgacggtg
gagcctgacgctgatatggtgtcagtgtcgcccacggtgacggcatcctcgtccaaggag
ccagagagagtggtggaggagttccagtggcctcagcgtagccagagtatggctcagctc
ccctccgagaagctgccaccaaagaagaagcgtctccgtctagccgaggctgctgcccag
tcttccggggagtccagctttgagtcggtatcgctggggccccggagccccagccaggag
agcaacatttcccactcacccagccaatctgcctcctttgaagacatgggggaaaaacct
gctgagccttccccctggggctccagctgcacccagggctcccacatgctagccgtgccc
tcgggcccccaccaacaatatcaaccccaaagagagatgcggcgctcagcctcggagcag
gcccctgccagcccacagcatacggatgaggttgtggagacgaggagcaaatcctttgac
tatgggtccctatcgctgcaacagtctgcatcagcctggagggagaggaggaagtgccta
ctggtgaagcatgccaccctgggcgagccagaccacgaggaaggggctgtggccagccac
tcgggcagaccagggagccccaagccgagcccgtcctacaccagccaccttgccctccac
ccagctgaagccagcacctcaaggctcagcccggaggccatagggaagactgtgcagctg
ttccaccagccccggatacccccattccccatgcaaccaactgggcatgatcggttccct
cttggccaggtagcccagctccaccctgtcactactgccatctcagatgtcctctccacc
cacatcattcacagaaccttcttacacaaacacccttctcctccaaccatacaagtccac
ccagggcagcttcacgtggcagaatgcttaggcctgcctctccatcctttctcagctctg
ctctccctgcagaaccccaccggggctggcgagactgtgtacctccctgtttcccctggg
ctcaccatccaagtccccacacagccccccataccctccactgtggttctcccttcccca
tctcctcagtccttagtccccctaccctgcctctatcccccgcctgtcatcgcaacgtgc
ctggcgcagctgacgccagtcgtgtcactggtggttccagtgcgcctccagacccacatg
accacctatgccagtgccctgtacaccaccctatcccagatcttggcatcagcccgctcc
caggagcccatctgctgcatggccatggttatcatgggccagctggagcaggacaagcta
cagaggtcctatctgaagatccccaccccggacttcaagagctacctgcccctgtctctg
cccctggagctgggctctgtgtccagggagggctacgggccactgggggctggagggagc
aaacgcatgctctcccctgcagccagtctggagcttagcacagaggcccagcgccagcag
aaacgagtgaaggaggaagaggaggaggaagagaaggtgggagaggaagaggaaaatagg
ggtactgggggagaacctgaagcaggggaggatgaagagaaagagccggagaaggcacag
ataggagtagttactgtgaaagtcgaggaggaagagaaggtacgggacccagaggggcac
agggaagagagggagatacaagggaaggctgaacctaagaaagaaaagaggggggaggag
aatgcgagccagggagtgagtgcttcctttgtaccccagagtccagagcgagccaaagcc
ccctcgtataccagccttcacacaaccacctcagtcagctggtgctacttgaactacgtg
aagcccaacccgtctgctcagagggagtcacaaacctccgtttacacctcctggagcgtc
agcatgtacaaccccaacctgccaggcctgtccaccaagctggccctgtccctgctgagc
tccaagcagaagcacagctcggagacatacaccatggccacagctctaacccctgcaaca
ggcaaggtggtctctgccagcagcagaaagacctacatttcagaggtacatgctatccca
cccagcacccccgtcgaagtgaaggagccaccacagcagcctgagacgaaggggaagaga
gaagagcaagggccctccacctccaaacagagcgaacctctccgcgtccaaatcttcgag
ggcgggtacaagtctaatgaggagtatgtgtatgtgcggggtcgcggaagaggaaagtac
gtgtgcggagagtgcgggatccgctgtaagaagcccagcatgctaaggaagcacattcgg
acacacacggatctccggccctacatctgcaaacactgcaacttcgccttcaaaaccaaa
gggaaccttaccaagcacatgaagtccaaggctcatgggaagaagtgccagtcaatggga
acgtctgggtcttcactggacgagccagagaccgaggaagcaggaggtattgaagagcat
ttgtctggctccgaggaccaggatgagcaccagttctctgacgtggatgattcagaggag
gatgatgatgaggaagaagaagagtcctcatcttgctcctccaactgcagtctgtctgca
agggggcactccagcagcagaagacagtcccagcagggcacgcctgacccctcagcccca
gaaccccagccagatcccagcccctcagccccagaaccccagccagatcccagcccctgt
cccagccatgatctctctcccacccgcagactgtggcccagcgggcatgcttcctctcca
aaaagccggagggcactgttctcccgccggggcctggacgcctcccccagggctttctcc
cctagcagtgaaagctgctctcccatccaaagcctttcccccagacgggagctggcctcc
cacaaccgacacctctcgccttcccccaagagaggaccatcccccatcagagctctatcc
cccctgaaccctatggctctctcccctctccggccaatgtcccctagccagtatcgggtg
gtgtgggcccgggcctctccctcgcccctgggggttcagcatagacctcggagctcaccc
agtcgtttgccatgggacatccccagtacgatggccagcgatcgcagacaggtgggttca
atggagaggataggaacaccaagtgaagggcagattggtccagagccctgcctgtcattc
cccccagctttccgtctgtcccccagggacagccctaaagcccagtccatggaccgcatc
ttcagccacctgccactgcactcacagcaggccagggtgccctacctgatgatccccatt
gggggcattcagatggtgcaggctcgtccccgctcccaccccactacccccacctcggcc
tcctctcccccgatggaggggcttctactgggccagaccaggagggaagcccactggtgc
aggacccccagaactcaagggctcagaactcctgaggaccactggtcagacagccaggaa
gtagtaggagccagccaatcagggctgtgcattcccagtttaaccccacccatacgttcc
aaaccctccacctcgcagcaaggtaggatggaccctgggatgataaacacaaagcaatac
gacagctcacacagctcctcccactcacacaggtctgaggcagagaccagagaacgatgg
ccctcacatggccaggcaggaccatccccctag
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integrated database retrieval system
