Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367612
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Entry
139367612 CDS
T10872
Name
(RefSeq) sal-like protein 4
KO
K19871
sal-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139367612
03036 Chromosome and associated proteins [BR:
ocla03036
]
139367612
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139367612
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139367612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2HC_2
zf-C2H2_6
zf-C2H2_15
B129_C2H2-zf
UBZ_FAAP20
DUF2225
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
139367612
NCBI-ProteinID:
XP_070961978
LinkDB
All DBs
Position
16:complement(41219182..41228154)
Genome browser
AA seq
1142 aa
AA seq
DB search
MRISTSGANFTTRRICKEGTKIALLFAPDGCTMSRRKQAKPQQINSDEPGSSENGVLQDG
QTEENGNEVKRFRMDEMKVCNKCCAEFIDEAEFLKHQNNCTKSHEMVIMKDGEGREVPDD
FSQSDFQKDHSDCQSSSKTLSKSNAVSMERMEEEPKSNSEEQPSKQDQVEMSDSPRPEMS
CHQHQASSKPQDSNVTLESMPGTKVAVTQHSSNSGLNNCKSPQASQEALQAIPVILEQLV
ALQQQQLQQIQLTEQIRIQVSMMAPQSLHSALGAAVDPLKALGVHLSQQLSAAAALIGKR
TGNQSLSLESLKQGKLPLSNGIPTSLARGMGPMPFKADMLKGLPDMANHLPAILPHSTGS
VVYQSPLTSLSSGMDPSKKVKSKIPNMPESKNGSGGDSMYKHKCKYCGKTFGNDSALQIH
LRSHTGERPFKCNICGNRFTTKGNLKVHFQRHKEKYPYIRMNPHPVPEHLDNIPTSSGIP
YGMSMPIEESNMVDMKPMLSLPSPGFHPSALQGFKPSFDCFRSDPFSQRASSGGDCVSIS
SNMFNHEMGSDQDHQVSKELMGALHHMNGKGLPGDHNSSETAKLQQMVDGLEKRTNDPNE
CYICHRVLSCQSSLKMHYRTHTGERPYKCKICGRAFSTNGNLKAHYGVHRANTPLKMQHS
CPICQKKFTNAVVLQQHIRMHMGGQIPNTPMPETQLDALEEIDSSLPDEKSMDTNGFECM
VDQDAELDSQEKPSDTSDSLAPSFSEEPHQPNQDPQSSMFSSIAAQENHMKNLTLPLNLQ
RQSGTASECDGVPPKESPSAAECIREHEYRNGRSPDISDSVSFHSSSPVNGLAAAYMAKS
PESAVPEDYTRNEHRTDSDSSSQDANGALDLTAPSFTQKNIKKEPGLPFTNREYAPSHLP
PFMRVPPSLVKLERQIPPESSMGMGPLFVSQMPQGVGGQPRDGSSAHRRSSKQHLCNSCG
KNFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHVGTHMWNSSARRGQRLSLDN
PMALMAISSESGNMMPEMMPSPRELGPPPPMNFDQSLWNQYTAAFTNGLSMKTNEISVIQ
NGGMPGSLAGGPTVCSTGGLMEMDGSHSGLPATMAEMERNGSECVARSQFQHFMEEGKIA
VN
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttctacttcaggggctaattttacaacccgaagaatttgtaaagaagggacg
aaaattgcgttactatttgctcccgatggttgcaccatgtccaggcgcaagcaagctaag
ccacagcaaatcaattccgatgagcccggttcgtcagaaaatggcgttctacaagacggt
caaactgaagagaatgggaatgaggtgaagaggtttagaatggacgagatgaaggtctgc
aacaaatgttgtgctgaattcatcgatgaggctgagtttttaaaacatcagaataattgc
actaaaagtcatgagatggtcatcatgaaagatggagaggggagagaagtaccagatgac
ttctcacagagtgactttcagaaagaccacagtgactgccagtccagcagtaaaactctg
tcaaagtccaatgcagtgtctatggaaaggatggaggaagaaccaaaatcaaacagtgag
gaacaaccatccaaacaagaccaggtggagatgtctgacagtcccaggcctgagatgagt
tgccatcagcaccaagcctcatccaaaccccaagattcaaatgtcaccttggagtccatg
cctggcaccaaagtggctgtcactcagcactcatcgaacagtggtttgaacaactgcaag
tctccacaggcctcccaggaggccttgcaagccatccctgtgatcctggaacagctagtg
gccctccagcagcagcagctccagcagatccaactgactgagcagatccgtatccaagtg
tcaatgatggctccacagagcctccactcggccctaggggcagcagtcgaccccctcaaa
gccttaggagttcatctctcccagcagctctctgctgcagcagccctgatcggcaagagg
actggcaaccagagcctctcgctagagtccctcaaacagggtaaactacctctgtccaat
ggcattcccacctcactggctcgaggcatggggccgatgcccttcaaagccgatatgttg
aaggggctcccagacatggccaaccacctaccagcgatactgcctcattcaacaggctcc
gtggtctaccaaagtcccctcactagcctctcatcagggatggatccctctaagaaagta
aagagcaagatcccaaatatgcctgagtctaaaaatgggtctggtggcgacagcatgtac
aagcacaaatgtaaatactgtgggaaaacgtttgggaatgacagcgcactccagatccat
ttgcgctcgcacactggagaaagaccatttaaatgtaacatatgtggaaaccgtttcaca
accaaaggaaacctcaaagtgcatttccaaagacacaaggaaaagtacccttacatcagg
atgaacccacatcctgtgccggaacaccttgacaacattcccaccagcagcggcatcccc
tacggcatgtcaatgcccattgaagaatccaacatggtggacatgaagccaatgctcagc
ctcccatctccaggtttccacccatcagcactgcaggggttcaagccttcatttgattgt
ttcaggagtgacccgttctcccaaagagcgtcatcgggaggtgactgcgtgtcaatttcc
tcaaacatgttcaatcacgaaatgggctctgatcaggaccaccaggtatctaaagagcta
atgggagcgctgcatcacatgaatggcaaaggccttcctggcgaccacaacagctctgaa
actgccaagctacagcaaatggtggatggactggaaaagaggaccaatgacccaaacgag
tgctacatctgccaccgagtgctcagctgccagagctccttgaagatgcattaccgtaca
catacgggcgagcggccctacaagtgtaagatctgtggacgtgccttctccaccaatggc
aacctcaaagctcattacggtgttcatcgggccaacacgcccctcaagatgcagcactct
tgccccatttgccagaagaagttcaccaatgcggtggttcttcagcagcacatccgcatg
cacatgggaggccagatccctaacacccccatgccagagacccagctcgatgccttggaa
gaaattgactcctctctgcctgacgagaagtccatggacaccaacggctttgagtgcatg
gtagaccaagacgcagagcttgactctcaagaaaagccaagcgacacctccgattctctc
gcaccatctttctctgaggaaccacaccaacctaatcaggaccctcaatcctctatgttc
tccagcatagctgctcaggagaaccacatgaagaacctcaccttgcctctcaacctgcaa
cgccaaagcggcactgcctcggagtgtgatggagtgccccccaaagagtccccatcagcc
gccgagtgcatccgggagcatgagtaccggaatggccgcagccctgacatctcagactct
gtctccttccactcctcatcaccagtcaacggactggctgctgcctacatggctaagtcc
cccgagtcagccgtccctgaggattacacccggaatgagcatagaacggactctgacagc
agctctcaggatgccaatggagctctggacctaacggcacccagctttacccaaaaaaac
atcaaaaaagagcctggcctacccttcactaatagagagtatgctcccagccatttgcct
ccttttatgagggtgcctcccagtctggtcaaactggagaggcagattcccccagagagc
tccatgggcatgggccctctatttgtctcccagatgcctcagggagtgggagggcagcca
cgggatggctccagtgctcaccgtagatccagcaagcagcatctgtgtaactcctgtggc
aaaaacttctcctctgccagcgcccttcagatccatgaaaggacccacactggcgagaag
ccctttggctgcaccatttgtggcagggccttcaccactaaaggcaacctcaaggtgcac
gttggaactcacatgtggaacagctctgcgaggcgcggccagcgcctctctctggacaac
cccatggccctgatggcgataagctcagagtctggcaacatgatgccagagatgatgcca
tctcccagggaactgggtcctcctccgccgatgaacttcgaccagtctctgtggaaccag
tacactgcagctttcaccaatggcctgtccatgaagactaacgagatctctgtgatccaa
aatggcggaatgcctggtagcctagccggtggtcctacggtctgctctactggaggcctg
atggaaatggatgggtcccactctggcctgcctgccaccatggcagagatggaaaggaat
ggctcagagtgtgtggctagatctcagttccaacatttcatggaggaagggaaaattgca
gtgaactag
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