Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367648
Help
Entry
139367648 CDS
T10872
Name
(RefSeq) PDZ domain-containing protein 4-like
KO
K24056
PDZ domain-containing protein 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139367648
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
139367648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
139367648
NCBI-ProteinID:
XP_070962018
LinkDB
All DBs
Position
16:complement(45347264..45371065)
Genome browser
AA seq
926 aa
AA seq
DB search
MGCNMCVVQKPEEQYRVMFQKGQISNTLCPFDGEGRLKVNGKELSCLSRDPTLDVRDPLL
SHVLKRGARRRAGLAGRLAGLDGTVAVPGGLTDCVDSGTQTDISFQHMLTLGRTAHHPGG
APPPHPPPSPPLPPILEPNLLNELLLEPEYYDPNDYFDITQHEADLRQDELEYEEVELYK
SRQQDKLGLTVCYRTDDEEDLGIYVGEVNPNSIAAMDGRIREGDRILQINGVDIQNREEA
VAILTQEDSTNISLLLARPEIENDNQLDPDELDLEVLDNAVHLPSPHQLRNRASMLGEGP
GVVGGGGVVVVRGRGHRDSPGLLHTLLSNSQELDSGVGRTDESTRNEESSEHDLLGDDQT
SAPTTNATNTPGSMRRFHSGQGDRDTPPLLHGHSTEFHFSTDSLLGLDCLGGGGGGDLAG
ERVYAADPVMMMMPGLTEEECERYRELLEIKCYYEKNSNALLLLGEHGGHGGQGGDGGIP
LDVNRNESLMQHEMALVEEELRHLEFKCRNILRAQKMQQLRERCLKAWPLEEESGAGAGR
VAPLVSEESCHHELSDINELPERERSDKDSTSAYNTGGESCRSTPLVSEQYPSPSAHGHS
SLEGGDSTSLPSRTPSRHRERGGRSERGQANLNQPYSPSSHRRGAEVKTSSPRGAKFRSL
SRDGGARRGSDGGVRCPKTNGTVEGREGRSAENSPYLSRRHSGSRIPLRYQSCMQLRSPS
TSEGLERPRDGSESPMSLGSTCKDIPQGPVSMPSLPIPPPLPPPASPRMEWKVKVRSDGS
RYVAKRPVRDRLLKARAIKIREERSGMTTDDDAVSEMKMGRYWSKEERKQQLLRAREQRR
RREFMMQSRLDCLRERDRESSGGGQQGAPQGQEPTTILELSHRRSQKKRSRRILDNWITI
QELLAHGTRSPDGKKVYNPLLSVTTV
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaacatgtgtgtggttcagaagcctgaggaacagtacagggtcatgttccag
aagggtcaaataagtaacacgctgtgtccttttgatggagaaggtcgactgaaggtgaat
ggtaaggagctgtcctgtctctcacgggaccccaccctggatgtgcgagaccccctgctg
tctcacgtgttgaagaggggggcccggcggcgggcgggactggcagggcgactagcgggg
ctggacgggacagtagcagttccaggggggctgactgactgtgtggacagcggcactcag
actgacatcagcttccaacacatgttgactctgggaaggaccgcccaccacccaggtgga
gccccgccccctcacccgcccccctcccctccactgccacccatcctggaacccaacctg
ctcaacgagctccttttagagccggaatattatgaccccaatgactactttgacatcact
cagcatgaggcggatctcaggcaggatgagttggagtacgaggaggtggagctctataag
tctcgtcagcaggacaaactggggttaacggtgtgctaccggacagacgatgaggaggac
ctggggatctatgtgggcgaggtcaaccccaatagtatagctgctatggatggccgtatc
cgagagggggatagaatcttacagataaacggggtggacatccagaacagagaggaggcg
gtggccattctgacccaggaggacagcaccaacatctccctgctcctggcccggcctgaa
atagagaatgacaaccagctcgacccagatgaactggacctggaggttctggataacgct
gtccacctgcccagcccccatcagctgaggaacagggcctccatgctgggcgaaggacca
ggggtcgtgggtgggggtggtgtggtggtggtccgcgggcgaggtcaccgtgactctcca
ggcctgctccacacgttgctgagtaacagccaggagctggacagcggggtgggtcgtaca
gatgagagtacccgcaatgaggagtcctcagaacacgacctactaggggacgaccagacc
agcgcccccaccaccaacgccaccaacacccccggcagcatgcgcaggttccactctggc
cagggggacagggacaccccaccccttctacatggccactccacagagttccacttcagc
acagactctctactaggtctggactgtctgggtgggggaggaggtggtgacctggcaggg
gagagggtctacgcagctgacccagtgatgatgatgatgccgggtctgacagaagaagag
tgtgagaggtacagggaactcttggagatcaagtgttattatgagaagaacagcaatgct
cttctgctgctgggggagcatgggggtcatgggggacaggggggcgatggggggattcct
ctggatgtgaacaggaatgagagcctgatgcagcatgagatggcccttgtggaagaggag
ctacgccacctggagttcaagtgtcgtaacatcctgagggcccagaagatgcagcagctc
cgggagcgctgtctgaaggcatggcccctggaggaggagagtggggccggggctgggcgg
gtggctcctttggttagcgaggagtcctgtcaccatgagctgtcagacattaatgagctc
cctgaaagggagcgctccgacaaggacagcaccagcgcctacaacacaggaggggagagc
tgcaggagcacccctctggtcagcgaacagtacccctccccctctgcacatggccacagc
agcttggaggggggagactctacctctttgccgtcgcggacccccagccggcacagggag
aggggaggcaggagtgagagggggcaggctaacctgaaccagccctactcccctagctca
cacaggaggggagcggaagtcaagacctctagcccgagaggggccaagttcagatccttg
tcccgcgacgggggggcaaggagggggtcagacggaggggtgagatgccctaaaaccaat
gggacagtggaggggagggaagggcgtagcgctgagaacagtccttatctgtcccgccgc
cactctggctccagaatccccctgcgctaccagagctgcatgcagctgaggtccccctcc
acatccgagggcctggagagacccagggatggcagcgagagtcccatgagcctggggagc
acatgcaaggacatcccccagggccctgtgtccatgccatccttacccatcccccctccc
ctgcctccgccggcctcgccgcgtatggagtggaaggtcaaagtacgcagcgacggatct
cgctatgttgccaagcggcccgttagggaccgccttctgaaggcccgggccattaagatc
cgggaggagcgcagcggcatgaccacggacgacgacgccgtcagcgagatgaagatgggc
cgctattggtccaaggaggaaaggaagcagcagcttctcagggcccgggaacagcgcaga
cgcagggagtttatgatgcagagcaggctggactgcctgagggagagggatagggagtcc
agtggcggtggacaacagggggctccgcagggacaggagcccactaccatcttggagctg
agccacaggaggagccagaagaaacggagccgtaggatcctggacaactggatcaccatc
caggaactactggcccacggaaccaggtcccctgacggcaagaaggtctacaaccctctg
ctgtcagtcaccactgtctaa
DBGET
integrated database retrieval system
