KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367675
Entry
139367675         CDS       T10872                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    139367675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139367675
Enzymes [BR:ocla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139367675
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    139367675
SSDB
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-B_box zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_2 zf-UBR zf-RING_10 ANCHR-like_BBOX U-box zf_RING_Vps8
Other DBs
NCBI-GeneID: 139367675
NCBI-ProteinID: XP_070962059
LinkDB
Position
16:48668409..48670838
AA seq 541 aa
MPLSKPKELLEHELSCPICLQLYTDPVYLPCGHNYCLACIQKATDVSGGEKSLPQCPECR
EEYGGTETLQRNFKLCGIIEGYRAVAPADHLKREPLKVRCDHCLDLETLAIKTCLKCEVS
LCARHLQHHTERGSFRTHDLVEPQTELGQRGCAIHGRLLEYFCASDMTSLCANCFIEGTH
QNHDVLTFEAAEEEMRRALEIQSKAVANRLQLTETLLQRAAEDQGTSEAVGDKLLSKSVD
LMDNMASLVSRYKDRMSLLLEKERGRQRESWQSDLGLLEEQKQQLMEAHQRTTEALTETE
KCLFINRFLLIEPQLREVVTGTVARVPNKVPLNPKRLQASLRMEDFRAEMARLLQSVHVL
LNPLELTFNLSTAHTSLLLSNDLQTVKYSGTKQAYADNPERFSTAPQVLCSQGFTSGEHI
WVVEVGDQSMWSMGLCYKSMPRKGDHSRLGHNPASWRLQWKNKKLTACHASSNVALAEMA
NQPLRVEVALDYEGGTLIFHSTKDRREHLHTFRAVFREAVYPAFSILSTREQSWITLQSG
V
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgcctctgtctaaaccaaaggagctgttagaacatgagctcagctgccctatctgcctg
cagctctacacggatcctgtgtatctgccctgtggccataactactgcctggcctgcatt
cagaaggctacagatgtcagcggtggagagaagagcctgcctcaatgccctgagtgcaga
gaagagtacggcggtacagagacactgcaaaggaacttcaagctctgcggcatcatagaa
ggctacagggccgttgcgccagcagaccacctgaagagagagccgctgaaggtgcgctgt
gaccactgcctggacttagagacactggccatcaagacctgcctaaagtgtgaggtgtcc
ctgtgtgccaggcacctgcagcaccacactgagagagggtccttcaggacccatgacttg
gtggagccccagactgagctgggccagagaggttgtgccatccacggacgcctgctggag
tacttctgcgccagcgacatgacctctctctgcgccaactgcttcattgagggcacccac
cagaatcatgatgtcctgacgttcgaggcagccgaggaagaaatgaggcgggccctggag
attcagagcaaggcggtggccaacaggctgcagctgaccgagaccctgctacagagggct
gctgaggaccagggcacctctgaggctgtgggagacaagctgctgtccaagtctgtggat
ttgatggacaacatggccagcctggtgagcaggtacaaagacaggatgagcctgctgctg
gaaaaggagagaggccgtcagagggagagctggcagagtgacctggggcttctagaagaa
cagaagcagcagctgatggaggcccaccagcgcaccactgaggccctcacagagacagag
aagtgtctgttcatcaacaggttcctgctaattgagccccagctcagggaggtcgtgacg
ggtaccgtggccagagtgcccaacaaggtccctctgaaccccaaacggctccaggccagc
cttaggatggaggacttcagggcagagatggctcggctcctccagtctgtccacgtcctg
ctaaaccctctggagctgacctttaacctcagcacagcccacaccagcctgctgctctcc
aacgacctgcagacagtcaagtacagcggtaccaagcaggcctacgctgataacccagag
aggttcagtaccgcaccccaggtcctgtgctcccagggcttcaccagtggggagcacatc
tgggtggtggaggtgggcgaccagagcatgtggtcaatgggcttgtgctacaagagcatg
cccaggaagggtgaccacagccggctggggcataacccggcctcctggcgtttgcagtgg
aagaacaagaagctgacggcgtgccatgcctcctcaaacgtggcgctggcggagatggcc
aatcagccactgagggtggaggtggctctggactatgaggggggaacactaatcttccac
agcaccaaggaccgtcgggaacatctgcacacgttcagggctgtgttcagagaggctgtg
taccctgcgttcagcatcctctccaccagagaacagtcctggatcacgctacagagtgga
gtgtaa

DBGET integrated database retrieval system