Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367676
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Entry
139367676 CDS
T10872
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139367676
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
139367676
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GFIT
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NCBI-GeneID:
139367676
NCBI-ProteinID:
XP_070962060
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Position
16:49487626..49678539
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AA seq
1460 aa
AA seq
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MTDDWKGLFERGRMIPPHSQTVRLAQDSSHTHSQGFQIILKHLDGPHIQQKKEGESEGNR
KREPVKYQLSVSLFDTSHQHFFGRTLKSSPQQMSGVHRAMFNEVVYLHTSLRLPSVVAVV
ELVALQPRAEGSQHALGCGFAILHLFSSMTEPQATEGDRRLSMHHGTPRTLLHPLVRDPI
EQNKLLRPIDGAHLVCSLKPHPALAPAMHLFPQNMLVSGDENIPGVTPSPTGDSLLKPHM
VKSFTCFLDRLSISLHPSLEKFESQLLQHVSTDCHNTKHSGPESSSVVVIQERRLHVGVH
NGWGFLERPQVVVLETTEATDWSRGRTKGGTSRQGTLTRDCSSSPSQSLALRSSLELKLP
SHQAVGIALQLEYVFSSSLIGDGKLSSTSTISRTAFMQCLRWGVWCPFQEWGALRAEEVK
LSLQGGSTPNPYGIMAYTSSSNSQSPAQVVDERDMVRFRLSSSSVQKASSSTAVSLRRSR
TGQQRKPPSPSPGQSRRASQASPPGSPQGPGLSMSQLAATSRYPTMSHSTAVSPWQQPFS
SQLYPSPLASAHQLSHVELPAASNITHLEVDLNVSPRDRLPAYQSAALANEGHLELQELP
FTPIHAPIITMGTHAAPSSSFVSSRSSLAHLYSAGFPNITDPSGLVAEVQDPTEPVNFDP
QREEADPLQGNVLLLQFLAFSRIPQQGGSSNWPDSVHFTFQLYRFPPVTTQRLKLLGIDK
LPKKSSETPPCVLAVINKDGTVNSGSPGLQLQFRVDGAFLQPGERRWFLRYLALHTLQVD
VWDSQSLLLIGSTALGLKHMLRQGRPAVQATHELEVITTEYMGEGVPVSLHRAPNPISVF
TTIKGRLHLRLGNVGCPVDQNKPNKPQCLPPSRSHIISPPDATSGFTGGSLSSKSIQRLS
VRNAARAQRLVELDGDLVPLLQSHMKEGGGTPCTNTPWWGETDDVRQRKLNRMVAVRQHE
GGQDGTGSEVKTKVTGRRAERAQLARDLRLMHAYRERSKAEGITHILSQAITIHHTLYAT
LGTAEYLEYVLRNPFNTPQTVTIYSEDPELSVITDCDEWRYFKTLTKTLTPLEEGMFHLK
EGTLAPQVYLRPKESVHVPLKYQTFVSDNSVVPQGPSLIPSGRSTQVAKKHLSNTVLAKS
IKVTFRAEDGKPLAICQVSVEPTPHVIDQTFRFYQPELSFLKKALRLPSWERTPVGDTDA
GSQISVRCSDPNVICETKMLAQGEPQDVYLKVPGSPSPQIRKFFVTVFTDKWLAVPAQVW
QVYVHFLQRVDISCVTGQRTCQSLLIRGTQATRKVRCYTSHPQELKVDPAEVFVLLPGVV
QDLQLCVCPLRAGSRFCYLTVVDVEQHTLVACWLLSLTCRLPIVSKAFEMCAPVGGGRGS
TRKITYTNPYPTSRVLLLRSDHPDLLQFKEDSFEIGGGETYRIGLRFAPSQSPGAQEILI
YINNQEETTEETFCVKVKYT
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgactggaaaggactgtttgagagaggacggatgattcctccacacagccag
actgttcgactggcacaggactcatcccacacccattctcaaggcttccaaatcatcctg
aagcatcttgatggacctcacattcaacagaagaaggaaggggagtcagaagggaatcga
aagagggaaccagtcaagtaccagctgagtgtttccctgtttgataccagccaccagcac
ttcttcgggagaacgttgaagagctcaccccaacagatgagtggtgtccacagggcaatg
tttaatgaggtggtgtacctccacacctctctgcgtctgccaagtgtggtggccgtggtg
gagctggtggcgttacagcccagggcagagggctcccagcatgcactggggtgtggcttc
gccatcctgcacctcttctccagcatgacagaacctcaggccaccgagggggacagaagg
ctaagtatgcaccacggaacaccaaggaccctactccatccactagtgagggaccctata
gagcagaacaagctgttgaggcccatcgatggtgctcatttggtgtgcagcttgaagcct
caccctgctctagcacctgccatgcacctcttcccccagaacatgctggtgtctggagat
gagaacatccctggggttacgccctcccctacaggagattccctgttgaagccccacatg
gtgaagagcttcacctgcttcctggacaggctgtccatctctctgcatccctccctggag
aagtttgagagccagctgctgcagcatgtcagcacggactgccacaacacgaaacactcg
ggtccagagagctcatcggtggtggtcatccaggagcggaggctccacgtgggggtccac
aacggctggggcttcttggagcgcccccaggtggtggtgctggagacaaccgaggccacc
gattggagcaggggacgtaccaaagggggcacgtcccgacagggcacactgaccagagac
tgcagctccagtcctagtcagagcctggctctacgtagcagtctggagctcaagctgccc
agtcaccaggctgtggggatcgccctccagcttgagtatgtcttctcctcgtcgctcatt
ggtgacggaaagctctcctcgacctccacaatctcccggacagccttcatgcagtgcctg
cgctggggggtgtggtgccccttccaggagtggggtgccctgagggccgaagaagtgaag
cttagtctgcagggcggctctacgcccaacccctatggaatcatggcctatacctcttcc
tccaacagccaaagtcctgcccaggtggtcgatgagagggacatggtcaggttccgtctg
tcttccagctcagtgcagaaggcctcgtccagcacagccgtgtctctgaggaggagcagg
acaggacagcagaggaaacctccctcaccctcaccaggtcaaagtcggcgtgcctctcaa
gcatctcctccgggatcgccacaaggcccagggctctctatgtctcagctggcagctact
tcacgctacccgaccatgagccactccactgccgtgtcgccatggcaacagccgttttcc
tctcagctctatccttccccattggcatcggcccaccagctgtcacatgtcgagctccca
gctgccagcaacatcacccaccttgaggtggacctaaacgtgtcccctagggaccgcctc
cctgcataccaatctgccgcgctggccaacgagggccacctggagctccaagagctgccg
ttcacccccatccatgcccccatcatcaccatgggaacacatgctgcgcctagctcttcc
tttgtgagttccaggagctccctggcccacctctactcagccggcttccccaacatcaca
gaccccagtgggctggtggctgaagtgcaggacccgacagaaccagtcaactttgacccc
cagagagaggaggcggatcccctgcagggcaatgtgctcctgctgcagtttctggcattt
tccaggataccacagcaaggggggagcagcaactggccagactctgttcatttcaccttc
cagctctaccgcttcccaccagtgaccacacagcgcctgaaactactgggcatcgacaag
ctgccgaagaaatccagcgagacgccaccctgtgtcctggccgtcattaacaaggatgga
acagtcaactctggctccccggggctccagctgcagttccgtgtggacggggcattcttg
cagccgggtgagagacgctggttcctgcgctacctggccctgcacactctgcaggtggat
gtgtgggacagccaatccctcctgcttatcggctccacagccctggggctcaagcatatg
ttgcggcagggccgtccagctgtacaggccactcatgagctggaggtcatcaccacagag
tacatgggtgaaggtgtgccggtgagcctgcaccgggcccccaacccgatcagtgtcttc
accaccatcaaaggtcggctccatctgcgcctgggtaacgtgggatgtcctgtagaccag
aacaaacccaacaagccccagtgtcttcctccgtcacgctcccacatcatctcaccgccg
gatgccacaagtggcttcaccgggggcagcttgtcctccaagagcatccaacgactcagc
gtgcgtaacgcagcacgggcccagaggctggtggagctggacggggacctggtgccgttg
ctccagagccatatgaaggagggcggtgggacgccctgcactaacaccccctggtggggc
gagaccgacgacgtacgccagcgcaaactcaatcgcatggtggccgtgcggcagcacgag
gggggacaagatggcaccggcagcgaggtcaagacgaaggtcacgggccgccgagcagag
cgtgcccagttggcgcgggacctgcgcctgatgcatgcctacagggaacgcagtaaggca
gaagggatcacccacatcctgagccaggccatcaccatacaccacaccctctacgccacg
ctgggcaccgccgagtacctggagtacgtcctccgcaaccccttcaacaccccacagact
gtcaccatctatagcgaagaccccgagctcagtgtcataacggactgtgacgagtggagg
tatttcaagacactgaccaaaaccttaacccccctggaggagggcatgttccacctcaaa
gagggcacgcttgccccccaggtgtacctgcggcccaaggagagtgtgcacgtccccctc
aaataccagaccttcgtctcagacaactctgtggttccccaggggccgagtctcataccc
agtggcagaagtactcaggtggccaagaaacatctatccaatactgtgctggccaagtca
atcaaggtgacattcagggcagaggatggtaagccgctggccatctgccaggtgagcgtg
gagcccacgcctcacgtcattgaccagacattccgcttctaccagccagagttgtccttt
ctgaagaaggccctgcgccttccctcctgggagagaacgccagttggagacacagatgct
gggtctcagatctcagtgcgctgcagtgaccccaacgtcatctgtgaaacaaagatgttg
gcacaaggggagcctcaagatgtgtatttaaaagtgccgggcagtccgagcccgcaaatc
cgaaagttcttcgtcacagtgttcactgataagtggctggcggtgcccgcccaagtctgg
caagtatatgtgcacttcctgcaacgggtggatatcagctgtgtgactggccagcggacc
tgtcaatcactgctgatacggggcacccaagccacccggaaggtccggtgttacacctcg
cacccacaggagctcaaggtggacccagcggaggtgtttgtcctcctcccgggtgtggta
caggacctgcagctgtgtgtgtgtccgttgcgggcgggcagccgcttctgctacctcacc
gtggtggacgtggagcaacacacgctggtggcctgctggctcctcagcctcacctgtcgc
ctgcccatcgtctccaaggcttttgaaatgtgtgcacctgtgggagggggtcgggggagc
acacggaagatcacttacaccaacccctaccccaccagccgtgtcctcctgctacggtca
gaccaccctgacctgctccagtttaaagaggacagttttgagattgggggaggggagacc
taccgcatcgggctgcggttcgctcccagccaaagtcctggtgctcaggagatcctcatc
tacatcaacaaccaggaggagaccacggaggagaccttctgtgtgaaagtgaaatacacc
tga
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