Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367712
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Entry
139367712 CDS
T10872
Name
(RefSeq) aladin-like isoform X1
KO
K14320
aladin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139367712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139367712
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139367712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
PD40
Beta-prop_WDR19_1st
eIF2A
Beta-prop_CAF1B_HIR1
EIF3I
Motif
Other DBs
NCBI-GeneID:
139367712
NCBI-ProteinID:
XP_070962111
LinkDB
All DBs
Position
16:54491987..54504635
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AA seq
508 aa
AA seq
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MMCSLALFPPPLSGYGETSQYDESNTDPAVWFGDSHPLNLYFPGESLKPRSRQECSSKAA
FRDHCETLYTRSAGAWRDAGLSGLLNEIANSSAEVPKWLEVSSSCVLALLRWVSSFHGSL
FPHLTLRSEDMTAEFSQVLNWSDCAVRSFAWHPHTQKCAVSLLDDSIKIYNPKSANTPTL
KHRLQHSVAALQWKPLCASTLAVACHNCLLVWHVDPTSFSTRPSSGCAQVLSHPGHSPVT
SMAWSPNGSLLVSASPRDTAMLVWDVAVESCVPLYRVGGGGVTYLSWSPDGSRVLAATPS
YLFRVWETRMWTCERWPCLKGRCQSGSWSPDGSRLLFSVQGETVIYALTFTDTPGMPLGM
SGGPKAATVVADLSETTLNTPDGDMAVGGEIQSLAWDPTGERLAVLLKGDAEAGRPAMIA
VFKTQINPAFKLLPCGFVHGETGTEPRLMQFNPNYKHGAQLTVCWSNGKITHVPFCFMPG
LGGSPSPPLSQGRTADYANQTLYTELIS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgttccctggctctgttcccccctccgctgtccggctatggagagacttctcaa
tacgacgagtccaacacagatccagcagtctggtttggggattcacatcctctgaatctg
tacttcccgggagagtcactgaaacctcgcagccgccaagagtgcagcagcaaggcagcc
tttcgggaccactgtgagacactgtacacaaggagtgcaggggcttggcgtgatgcaggc
ctctctggactcctaaatgaaatagccaactccagtgcagaggtgcccaagtggctagag
gttagctctagctgtgtcctggctttgctacggtgggtctcctccttccacggctctctg
tttcctcatctcacattaagaagcgaggacatgaccgctgagttttcccaggtgctcaac
tggtcggactgtgcagtgcggagcttcgcctggcacccacacacccagaagtgtgctgtt
tcccttttagacgactccatcaagatctacaaccccaagagtgctaatactcccacgcta
aagcaccgtctgcagcacagtgtggcagccctgcagtggaagcctctgtgtgcgtctacc
ctggctgtggcctgtcacaactgcctgctggtctggcacgtggaccccacctcgttctct
accagaccttcttctggctgtgcccaggtcctgtcccacccaggccactcccctgtcact
tccatggcatggtcacctaacggatctctcctggtgtcggcctctcccagggacactgcc
atgctggtgtgggatgtagctgttgagagctgtgtgcctctctaccgtgtgggaggggga
ggagtcacgtacctatcctggtcccctgatggcagtcgcgtgctggcagctacaccctcc
tacctcttcagggtttgggaaaccaggatgtggacttgcgagcggtggccttgtctgaag
ggacgctgtcagtctggcagttggagtcctgatgggagtcggctgctcttcagtgtgcaa
ggagagactgtcatctatgccctaactttcactgacaccccagggatgccattagggatg
tcaggggggccgaaggcagcaacagtggtggccgacctgtctgagacaaccttaaataca
ccagatggagatatggcggtcggaggagagatccagtcgctagcgtgggacccgacagga
gagagactagccgtgcttctcaaaggagatgctgaagcaggccgccctgccatgatcgca
gtgttcaagactcaaatcaaccccgcttttaagcttctgccatgtggttttgttcacggg
gagaccgggacagagcccagactgatgcaattcaaccccaactacaagcatggagcccag
ctcactgtgtgttggtcaaatggaaagattactcatgtgcctttttgctttatgcccggc
cttggaggcagcccctctccccccctgtcccagggcaggacagcagactacgccaaccag
acactctacacagaactcatctcctaa
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