Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367747
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Entry
139367747 CDS
T10872
Name
(RefSeq) A-type voltage-gated potassium channel KCND1-like
KO
K04891
potassium voltage-gated channel Shal-related subfamily D member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139367747
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
139367747
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GFIT
Motif
Pfam:
Ion_trans
DUF3399
BTB_2
Ion_trans_2
Shal-type
BTB_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
139367747
NCBI-ProteinID:
XP_070962168
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All DBs
Position
16:65357852..65428485
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AA seq
635 aa
AA seq
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MAAGVATWMPFARAAAVGWLPLAQQTMPKPPVDKTSRSDEILFVNVSGLRFQTWKNTLDR
YPDTLLGSSEKEFFYNEETQEYFFDRDPEMFRHILNFFRTGKLHYPRHECIQAFEEELAF
YGIIPEIIGDCCMEEYRDRKKENQERLAEDTEAENAGDAPLPPDATLRDKLWRAFENPHT
STMALVFYYVTGFFIAVSVIANVVETVPCRPLKGSIKDLPCGEKFSVAFSCLDTACVLIF
SCEYLMRLYAAPSRCDFARSVMSVIDVVAILPFYIGLIMPENEEVSGAFVTLRVFRVFRI
FKFSRHSQGLRILGCTLQACASELGFLLFSLTMAVIIFATVMFYAEKGTKGTTFSSIPAS
FWYTIVTMTTLGYGDMVPDSIAGKIFGSICSLSGVLVIALPVPVIVSNFARIYHQNQRAD
KMRAQQKVRQARIRMAKKGATNAFLQHKEDGGLQGGDSDSTAFCVKNRSAFEHQHHHLLQ
CLEKTTNHEFTDEVTYSEVCMMDSMGFRTSRSTSLSSQQGATTTCCSRRAKRRAIRLANS
TVSVSRGSVQELDTLHVTKTPVGTQYPHSRSSLNARAEDLKLNCTDYTAAIISIPTPPAN
SPDESLPNSPVIPGILRNSRSSIYNTQETVKISSL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggagttgcaacatggatgccctttgctcgggcagcagccgtgggctggcta
ccactggcccaacagaccatgcccaagcctcctgtggacaaaacaagtcgcagtgatgag
atcctgtttgttaatgtgagtggactacgcttccagacatggaagaacacattggaccgt
tatccggacacccttctaggcagctcagaaaaggagtttttctacaatgaggaaactcag
gaatatttctttgacagggatccagagatgtttcgccatattctcaacttttttagaaca
ggcaagctacactatccccgacatgaatgcattcaggcctttgaggaggagctggctttc
tatggcataatacctgagatcataggtgactgctgtatggaagagtaccgggatcgtaag
aaggagaaccaggagcgtttggctgaggacacagaggcagagaatgccggagacgctccc
ctgcccccagacgccacgttacgtgacaagctgtggagggccttcgagaaccctcacacc
tccaccatggccctggtgttctactacgtcaccggcttcttcatcgccgtgtctgttatt
gccaacgttgtggaaacggttccctgccgaccactcaaagggagtataaaggacctgccg
tgtggtgagaagttttctgtggccttctcttgtttggacacggcctgtgtgcttattttc
tcctgcgagtacctcatgaggctgtatgctgcccccagccgctgtgattttgcacgttcg
gtgatgagcgtgattgacgtggtggccatcttgcccttctacatcggccttatcatgccc
gagaacgaagaagtcagcggggcctttgtcaccctgcgagtcttccgggttttccgaatc
ttcaagttctcccgccactctcagggcctgcgcatcctaggctgcactctgcaggcctgc
gcctcggagctgggcttcctcctcttctccctcaccatggctgtcatcatcttcgccacc
gtcatgttctatgctgagaaaggcaccaagggaaccacgttttccagcatccccgcctcc
ttctggtacaccattgtcaccatgacaacactaggatatggagacatggttccagactcc
atagcgggcaagatatttggctccatttgctccctcagtggcgtgctggtgattgctcta
cctgtgcctgtcatagtctccaacttcgcaaggatctaccaccagaaccaaagggcagat
aagatgagggcacagcagaaagtgcgtcaggcaaggattcgaatggctaaaaaaggggcc
accaatgcattcttgcagcacaaagaggatgggggattgcagggtggcgatagtgacagc
acagctttttgtgtgaagaacaggtccgccttcgagcatcaacatcatcatctattgcag
tgcttggagaaaaccaccaatcacgagttcaccgatgaagtcacctacagcgaggtgtgt
atgatggactcaatgggcttccgcaccagccgcagcacttccttgtccagccagcagggg
gccaccaccacctgctgctcccggcgggccaagaggagggccattcgccttgccaactcc
accgtatctgtcagccggggaagtgtgcaggagctggacacgctgcacgtcaccaagaca
cctgttggtactcagtacccacatagtcgctccagtctaaacgccagagctgaagacctg
aagctgaactgtactgactacacagcagccatcatcagtatccccactcccccagccaac
agtcctgatgagagcctacctaactcacccgtcatccctggcatcctacgcaactctcgc
tccagtatctataacacccaggaaactgtcaagatctcctctttataa
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