Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367851
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Entry
139367851 CDS
T10872
Name
(RefSeq) tumor susceptibility 101a
KO
K12183
ESCRT-I complex subunit TSG101
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
ocla03272
Virion - Hepatitis viruses
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139367851
03272 Virion - Hepatitis viruses
139367851
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139367851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139367851
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139367851
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
139367851
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139367851
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
Tuftelin_like
DUF3450
STB2_C
Het-C
SSNA1
SPC25_N
Helical_needle
UQ_con
FapA
ANG-1
CC_Bre1
SlyX
CEP135_N
Exonuc_VII_L
T4SS_LegC2C7
TPR_IF140_C
Xpo1
DUF724
CHASE3
FlaC_arch
LEKR1
Spc7
ENTR1
RsmA_N
DUF5685
DUF6468
Prominin
CRWN_second_CC
EMP24_GP25L
CCDC90-like
Nsp1_C
APG6_N
CCDC138_cc
Motif
Other DBs
NCBI-GeneID:
139367851
NCBI-ProteinID:
XP_070962288
LinkDB
All DBs
Position
2:38816505..38836515
Genome browser
AA seq
390 aa
AA seq
DB search
MAVVNEGSLKKMLKQYKYRDLTVREITNVISQYKDLKPVMDSYVFNDGSTRTLVSLTGTV
PVSYRGNIYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQAPYQAFQAAGPPNPSYMPGMPALSPYGPNPT
PGGYPGYQYPSANSYPATAGTTHYTSQIPASTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEEMVSRLDQEVAEVDRNIDLLKRKDEELSE
ALEKMENQSENNDIDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgtcaacgaaggctcattgaagaaaatgctcaagcaatacaaatacagggac
ctgactgttcgtgagataaccaacgtcatctcccagtacaaggacctgaagcctgttatg
gattcatatgttttcaatgatggctccactagaactctggtgagcttaacaggaacagtg
ccagtcagctacagaggaaacatatataacatcccagtgtgtctatggctgctggacacc
tacccatacaaccctcccatctgttttgtgaagcccaccagtgccatgatgatcaagact
ggcaaacacattgatgccaatggcaagatctacctgccctatctgcacgagtggaaacat
ccccagtcggacctgtatggtctgatccaggtgatgatcgtggtgtttggggaggagccc
cccgtattctcccgccccaccacacaggccccctaccaggccttccaggctgcaggaccc
cccaacccatcctacatgccaggtatgccagcgctctccccgtacggaccaaaccccacc
cctggtggctatccagggtaccagtaccctagtgcaaactcgtatcctgccacagctggc
actacacactacacttcccagattcctgcctccactgtgggccccagtagggatggtacc
attggcgaggacaccatccgtgcgtcgctgatctcggcggtgagcgacaagcttcgttgg
aggatgaaggaggagatggaccgggcgcaagccgagttggacgcgctgaagaggaccgag
gaggacctgaagaaaggacaccagaaactggaggaaatggtctcgcggctagaccaggaa
gtggcggaggtggacaggaacattgacctactgaagcgtaaggacgaggagctgagcgag
gcactggagaagatggagaaccagtcggagaacaacgacatcgatgatgtaatcgtgccc
acggcgccactctacaagcagatcctcaacctgtacgctgaggagaatgccattgaggac
accatcttctacctgggagaggcgctgcgccgtggggtcatagacctggaggtgttcctc
aagcatgtgcgtctgctctcccgaaagcagttccagctgcgagccctcatgcagaaagcc
cgcaagaccgccggccttagtgacctctactga
DBGET
integrated database retrieval system
