Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367927
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Entry
139367927 CDS
T10872
Name
(RefSeq) LLGL scribble cell polarity complex component 2 isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139367927
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139367927
NCBI-ProteinID:
XP_070962420
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Position
16:9477425..9509215
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AA seq
1013 aa
AA seq
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MKRFRRHGQESHRDRIKQELYGFNKTVEHGFPHQPSALVFSPSLQLLAIGTRSGAIKLYG
APGVEFMGLHDENAAVTQVHFLPQQVDLVTLLDDNSLHMWTLRAHHGVSELLETGRFTLT
GPPGAPPSVTRVTAVLTHSSGDMLFLGTEGGHVFVVEVPGFRELEERNISLENVTNSLPE
DYGGRRSLEHVESLQENPVNPRQVLIGYGRGIMVIWDLERHSAVKHIPATQQLESVWWTE
DGGHVLSSHSDGSYCRWMLAGEGTQSEPEKSEVPYGHFPCKAISKIIQLPTEQGPPFLFL
SGGMPRASYGDRHCISVIHSKTHVALDFTSRIIDFFVIRDGPDHTGDPSALVVLVEEELV
VIDLQTEGWPVIQTPYLVPLHCSAITCSHHVSAIPLKMWERVLSAGALQNTHYSKKPWPI
TGGQNLSPDAPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFLTDAEPNDNMNQC
TEGEWPPFRKVGCFDPYSDDPRLGVQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTV
EATVADLLQGQEGFRWKGHTRLEVREEPVTFPPGFQPFALVQCQPPAVVTALTLHSEWKL
VTFGTSHGFGLYDYQQKSNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRV
SLRKHHVNSAAKVQEANARLEAELAEMELAPVQRKIEARSSDDSFTGLVRTLYFADTFLS
DSSHHTPSLWAGTNGGSVFAYQLRLPPVERRSEDPVSAHPAKEIQLMHRAPVVGIVVLDG
HGSPLPEPLEVAHDLARSADMQGCHQLLVISEEQFKVFTLPKVSAKMKLKLTAIDGSRVR
RVGVAWFGSSRSEDYGESGLTVLTNQGDLHVVSLPGVKLQVQYPCIRREDVSGIASCVFT
KHGQGFYLISPSEFERFSLSARCVVEPRSLVEVPSQTPGTTLPRAHRYTPTANSTRDTDD
VESSARRVMEHALLNDETVLQEIQKSLEGYQPTFLENNVKSALAGGKVLTNGD
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggagacatggacaggagtcccacagagatcggatcaaacaggagctc
tatgggttcaacaagacggtggagcatggttttccccaccagcccagtgctctggtcttc
agtcccagcctacagctcctggccatcggcacacgctccggcgccatcaaactttatgga
gctccaggtgtagagttcatgggtctacatgatgagaacgctgccgtcacacaggtccac
ttcttaccacagcaggttgacttggtgactctgttggatgacaacagtctccacatgtgg
accctccgagctcaccacggagtctctgagctgctggagacaggacgcttcacactcact
ggaccaccgggtgctcctcccagtgtgactcgtgtgacggcggtgctgacccactcctct
ggggacatgttgtttctgggaacagaggggggacacgtgttcgtagtggaggtaccgggc
ttcagagaactagaggagaggaacattagcctggagaatgtcaccaacagtttaccagag
gactatggaggtcgtaggagcttggagcatgtcgagtccttacaggagaatcccgtcaac
ccacgccaggttctgattggctacggacgaggcatcatggtcatctgggacctggagcgc
cattcagccgtcaaacacatccccgctactcagcaacttgagagcgtgtggtggacggag
gacggtggccatgttctcagttcccatagcgacgggagctactgtcgctggatgttggct
ggggaggggacacagagcgaaccagagaagtccgaagtaccgtacggccacttcccctgt
aaggccatctctaaaatcatccagctccctacagaacaagggcctccgttcctcttcctc
agtggcggcatgccccgggccagctacggagacagacactgtatcagtgtgatccacagt
aaaacacacgtggctctggacttcacctccagaatcatcgacttcttcgtcatcagagac
ggaccagaccatacaggcgaccccagtgcgttggtggtcttagtagaagaggagttggta
gtgattgatctccagactgaagggtggccggtcatccagactccgtacctggtgcctctc
cactgttcggccatcacctgctcccaccatgtctctgctatacccctgaagatgtgggag
agggtcctgtctgccggagcactgcagaacacacactactctaagaagccgtggcctata
acaggaggacagaacctgtctcccgacgctcctcagcgagacctacttctcacagggcac
gaggacggcacggtgcgtttctgggacgcgtcgggagtctgtctgtaccccatgtacaag
ctgagcacggcaggggtgttcctcactgacgcagaacccaatgacaacatgaaccagtgc
acagagggagagtggccacctttcagaaaggtgggttgttttgacccgtacagtgacgac
cctcgcctgggcgttcagaagatccacctgtgtaaatacagtggttacctgactgtagct
ggcactgctggacagatcctggtgttagagctgaacgatgaggcagcggaacagacggtg
gaggccacggtagctgacctgctacagggacaggagggcttccgctggaagggccacacg
cgtctggaggtgagggaggagccggtgacgttccccccaggattccagccctttgccctg
gtccagtgtcagcctcctgctgttgtcaccgccctcaccctgcactctgagtggaaacta
gtgacctttgggaccagccacggcttcggactctacgactaccagcagaaaagcaacgtc
ctcgtcaggtgtactctgaaccccagtgaccagctggctatggaaggtcctctgtccaga
gtaaagagcattaagaagtctctccgccagtccttcaggaggatcagacgcagccgagtg
tctttacgcaaacaccacgtcaacagcgctgctaaggtgcaggaggccaatgctcgtctg
gaggctgagctagcagagatggagttggctcctgttcagagaaagatagaggctcgatcc
tcagacgactccttcactggcctcgttcgcacactgtacttcgctgacaccttcctctca
gacagctcccatcacacgccctctctctgggcagggaccaatgggggctcggtattcgcc
taccagctccgcctaccgcctgtggaacgcagatcagaggaccccgtctccgcccaccct
gctaaggagatccagctgatgcaccgtgctccagtagtgggcatcgtggtgttggacggc
cacggttcccctctgcctgagcccctggaggtggcccacgacctggcccgctcagctgac
atgcagggctgccaccagctactggtcatatccgaggaacagtttaaggtgttcaccctg
cccaaggtgagcgctaagatgaagttaaagctcaccgccatcgatggttcgcgcgtgcgc
agggtgggcgtggcctggttcggcagcagccgctcggaggactatggtgagagtggcctc
accgtcctgaccaatcagggagacctccacgtggtgtcgttgccgggggtgaaattgcag
gtccagtacccctgtatccgcagagaggacgtcagcggcatcgcttcctgtgtcttcacc
aaacacggacagggtttctacctgatctctccatctgagtttgagcgtttctctctgtcc
gctcgctgtgtggtggagcccaggtctctagtggaggtgccctcccagacacctggcacc
accctgcctcgggcgcacaggtacactcccactgcaaattccacgcgggacaccgatgac
gtggagagctctgctagacgtgtgatggagcatgctttgctgaatgacgagactgtgctt
caggagatccagaaatctctagaaggataccagccgacgttcctggagaacaacgtgaag
agtgctctcgctggagggaaggtgctgaccaatggagactga
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