Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367956
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Entry
139367956 CDS
T10872
Name
(RefSeq) neurexin-1a-like
KO
K07377
neurexin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139367956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139367956
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
139367956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
139367956
NCBI-ProteinID:
XP_070962478
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All DBs
Position
16:complement(11647141..11731172)
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AA seq
1480 aa
AA seq
DB search
MCVRVCVMAVCVGAAAPLLCVWLCLCSLGGSRGEVLEFGGVSGQWGRFPVWNACCESILS
FSVRTHSADGLLLYLDDEGFCDFLELLLLHGKLRLRFSIFCAEPAEVSSGVAVSDGHWHA
VRVKRDWRNTSLEVDGKMEGWAEVKSKRKDMTVFSHTFMGGVSPELHASPLRLTSPGVRD
HASFAGWLAGVTVNGSVAVLEGSEGVTVGDGCGPAHECQNGGVCSVVEMRAVCDCTDTGY
KGNDCSEEHYNPGLAHLMIGDQAREDDVATFKGSEYFCYDLSPSPIQSSSDEITLSFKTL
QRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNSWHDVKVTRN
LRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVY
KNNDVRLELSRLAKQGDAKMKVSGIVAFKCESVATLDPVTFDTPESFVALSKWSAKKAGS
ISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTLKVDFFAIEMLDGHLYLLLDMGSGTT
KTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSQRTAYTAPGDSEILDLDDILYLGGLPED
RQGLIFPTEVWTALLNYGYVGCVRDLFVDGQSKDIRRLAEAQRAVGVKPSCSREPPKQCL
SNPCQHSATCREGWNRYVCDCSGTGFLGRACERDATILSYDGSKFMKVQLPVAMHTEAED
VSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTASKGPETIFAG
LGLNDNEWHTVRVVRRGKSLKLTVDDLQSVEGQMAGDHTQLEFHNVETGIVTEKRFMPAV
PSNFIGHLQGLTLNGMPYVDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSYVTLPTL
QAYYSMHLFLQFKTTSPDGLVLYNRGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGNSNS
PLNDNHWHNVLISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYVGGVAKEMYRDLPK
LVHSREGFQGCLATVDLNGRLPDLLADALATTGQVERGCEGPSTTCQEDSCASQGVCLQQ
WEGFSCDCSMTSFGGPLCNDAGTTYIFGRDGGVIVYTWPPNERPSTRADRLALGFSTQQK
HATLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEETAKSVNDGKYHIVRFTRSG
GNATLQLDDLPIIERYPSGNIDNERLAIARQRIPYRLGRIVDDWLLDKGRQLTIFNSQTT
VTVGRGKEAGQFQGQMAGLYYNGLKILNMAAEGHAHIRLEGSTRLVGDMPSSSITPQSSA
AAGGNRLDPAPNAGDITTTTATNKKQGGGTTQQSTDDLLVASAECPSDDEDIDPCDPSSA
AHPPLPEVKPFPGTSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVD
ESRNYISNSATQPNGSTKDKPLGIAKISKNKNNKDKEYYV
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgcgcgtgtgtgtgatggcggtgtgtgtgggggccgcggcccccctgctatgt
gtctggctgtgcctctgtagccttgggggatccagaggggaggtgctagagtttgggggg
gtttcgggacagtgggggcggttcccggtgtggaacgcgtgctgcgagagcattctgtcg
ttcagcgttagaactcacagcgcggacgggctgctgctttaccttgacgatgaaggattc
tgcgacttcttggaactcttgttgctacacggaaaactccgcctacgattctccatcttc
tgtgccgagccagccgaggtgagttccggggttgccgtgagcgacggccactggcatgcc
gtgcgtgtgaaacgggactggaggaacacaagccttgaggtggatggaaagatggaggga
tgggcggaggtgaagagcaaacggaaagacatgaccgtttttagccacacgtttatgggc
ggggtttccccagagctccatgcctctccgctccgcctcacttcccctggtgtaagagac
cacgcctcttttgctggctggctcgctggggtcaccgtcaacggatcggtggccgttctg
gaaggatcggagggtgttaccgtgggagacgggtgtgggccggcccacgagtgtcagaac
ggaggggtgtgttctgttgtcgagatgagggccgtctgcgactgtaccgacaccggctac
aaaggcaacgactgcagcgaagaacactacaacccaggtctggctcacctgatgatcggc
gaccaagcccgtgaggacgacgtagcaacctttaaggggtcagagtatttctgctatgac
ctgtctcccagccccatccagtcctctagtgatgagatcaccctgagctttaagaccctg
cagaggaacggcctaatgctccacacgggcaaatcagccgactacgtcaacctggcctta
aagaacggagccgtgtcactggtcatcaacctggggtccggggccttcgaggccctggta
gagccggttaatgggaagtttaacgataactcctggcacgatgtcaaggtcacacgcaac
ctgagacaggtgaccatctccgtggacggcatcttgaccactacgggctacacccaggaa
gactacaccatgttgggctcagacgatttcttctacgtgggtggaagtcccagtactgct
gacctccctggatctcctgttagcaacaactttatgggctgccttaaagaggtggtgtat
aagaacaatgatgtacggttggagctgtctcggctggctaagcagggagatgctaaaatg
aaggtgagcggtatagtggcgtttaagtgtgagagcgtggcgaccctcgatcccgtgacc
tttgacaccccagagtcgtttgtggcattgagcaagtggagcgccaagaaggcggggtca
atctcctttgacttcagaacgacagaacccaacggactgatgctcttcagccacgggaaa
ccacggcaacagcaacgcaaggacccccgcacaccccccaccctaaaggtggatttcttt
gccatcgagatgctggatggtcacctgtatcttctgttggacatgggctcaggaaccacc
aagaccaaggccatcgacaggaaagtcaacgatggcgagtggtaccacgtcgacttccag
agggacgggcgctcaggtactatctcagtgaactcacagcgtacagcgtacaccgctcca
ggggacagtgagattctagacctggatgatatcctgtacctgggaggattaccggaggac
cgccaaggactcatctttcctactgaggtgtggacagcgttgttgaactatggatatgtg
ggctgtgtgagagacctgtttgtggacggtcagagtaaagacatccgtcgtctggctgag
gctcagagggctgtaggggtgaaaccttcctgctccagagagccccctaaacagtgtctg
tccaacccctgccaacacagcgccacctgcagggagggctggaacagatatgtgtgtgac
tgctctgggaccggattcctgggacgggcctgtgagagagatgcgaccatcctatcctat
gatggtagtaagtttatgaaggtccagttgcctgtagcgatgcacaccgaagcagaggat
gtgtcgctacgttttcgctcccagcgggcctacggtgttctcatggcaacaacatcacgg
aactcagccgacacgctccgactggagctggacggggggcgtgtccgactcactgtcaac
ctagactgtatcaggattaactgtaccgccagtaagggtccagagaccatctttgcaggg
ctggggctgaatgataatgagtggcacactgtcagagtggtgcgacgcgggaaaagcctc
aaactcaccgtcgacgacctgcaatctgtagaaggtcagatggcaggtgaccacacccag
ctggagttccacaacgtggagacaggcattgtgacggagaagcgcttcatgcccgctgtg
ccctccaacttcatagggcacctgcagggcctcactctcaatgggatgccctatgtagac
ctctgtaagaacggtgacatcgactattgcgagctgaacgctgtgattggttataagagc
atcgtggcggacccagtgacgttcaggtcacggtcgagctacgtgaccctgccaacgctc
caggcctactactccatgcacctgttcctccagttcaaaaccacctcccctgacggactc
gtactctacaacagaggagacggaaacgacttcatagtggtggagctggtcaaaggctac
ctccactatgtgtccgacctggggaacggggctcacctgatcaaagggaactccaactct
cctctgaatgacaaccactggcacaacgtcctcatatccagagacaccaacaacctgcac
actgttaagatagacaccaaggtcaccacacagaccactatgggggccaagaacctggat
ctcaaaggtgacctgtacgtagggggcgtggctaaagagatgtaccgtgaccttcccaag
ctcgtccattcccgcgaaggcttccagggttgcctagcaaccgtcgacctcaacggccga
ttacccgacctgctggccgacgcccttgctacgaccggacaggtggagaggggctgtgaa
ggtcctagtactacctgtcaggaagactcctgcgccagtcagggcgtgtgtttacagcag
tgggagggatttagctgtgattgcagtatgacatcattcgggggaccgctctgcaatgac
gcggggaccacttatatctttggtcgtgacgggggtgtgatcgtgtacacctggcctcct
aacgagcgccccagcacacgggctgaccggctggcgctgggcttcagcacacagcagaaa
cacgctactctgctacgggttgacagcgcctcgggactgggagactacctacagctacag
atagataaaggaaatattcgggtagtgtttaacgtggggacagatgacatcaacattgaa
gagactgctaaatccgttaatgatgggaagtaccacatagttcggtttacccgcagcgga
ggcaacgcaaccctgcagctggacgacctgccaatcatagagcgctacccctcaggcaac
attgataacgagcgcctggccatcgctagacagagaatcccctatcggctcggtcgaata
gttgacgattggctactcgacaaaggccgccagctgaccatcttcaacagccagacgacg
gtgacggtaggaagaggaaaggaagcaggtcagttccagggtcagatggccggtctctac
tacaacggactgaagatactcaacatggccgccgagggacacgcccacatccgcctggag
ggcagcacacgattggttggggacatgccctcctcctccatcactccccaatccagcgct
gccgccgggggcaaccgattagatcccgcccccaatgccggcgacatcaccacgacaacc
gccacaaataagaagcaaggaggaggaactacgcagcagtcaacagacgacctgctggtg
gcatcagctgagtgtcccagtgatgacgaggacattgacccatgtgaccccagctctgca
gcccacccccctctcccggaggtcaagccgttcccggggacgtcggaggtggtaagggag
tccagtagcaccacaggcatggtggtgggcatcgtggcggccgccgccctctgcatcctc
atcctgctctacgccatgtacaagtaccgcaaccgggacgagggctcgtaccacgtggac
gagagccgcaactacatcagtaactctgccacccagcctaacggcagcaccaaggacaag
ccgctgggcatcgccaagatctccaagaacaagaacaacaaagacaaggagtactacgtg
tga
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