Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367957
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Entry
139367957 CDS
T10872
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Pattern recognition receptors [BR:
ocla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139367957
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Other DBs
NCBI-GeneID:
139367957
NCBI-ProteinID:
XP_070962479
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Position
16:complement(11459652..11466422)
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AA seq
1131 aa
AA seq
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MATSVPDLLLAILEELVGNDLKTFHWYLAQSVPDGFPLIPKGHLENADRQDTVDTMVNTY
GHDVAMKISLEILRKMNQKDLSKTLTVDQQEAEVEVAAASIRVPDSPVYITCTAQTGGHV
VAPSLSGCHIGGPVHFNIRVNSLDEDPIVPSQASPAHFTMFPPEPENTEDNDERIESCQK
KLKHNLHSRFVSVFEGLASHGNRKLLNQIYTELYITEAGSTEVNSEHEVRQIETASRRTA
IQETPIQCNDIFQPFLDQSIRTVLTKGVAGIGKTVSVHKFILDWADGKANQNLQLIFPLS
FRELNLVRKKRCSLIELLNGFFTETKETEISNYDNYQVLFVFDGLDECRLPLDFQNNDIL
FKITESTSVDVLLTNLIKGNLLPSAQLWVTTRPAAANQIPPECVDKVTEVRGFNDPQKEE
YFRNRISDENLASRIITHIKTSRSLYIMCHIPVFCWISAIVLERKLEKAGSGEMPKTLTQ
MYSHFLAFQEKDMDLRLQGRGTPDPDWMRKSIMSLGKLAFQQLEKGNLIFYEEDLRECGI
HIGQASVYSGVCTEIFSEELTLCQGKVFCFVHLSIQEFLAALYVFLTFINDNVNLLAKQQ
SFLRRFPFGNSSSTSFYKAAVDKALQSEHGHLDLFLRFLLGLSLESNQILLRGLLTQKTS
RSQTNKESVKYVKEKIKENPSPERCINLFHCLNELHDHSLVEEIQSYLGSGTLSRAKLSP
AQWSALVFVLLTSEEELDEFELKKYSRSEEGLLRLLPVVKASRTALLNRCKLTERCCEAL
ASALSSHSSHQRELDLSHNDLQDSGVKLLSAGLASPQCKLETLRLRRCKLTERCCEALAS
ALSSNSSHMRELDLSDNNLQDSGVMLLSAGLGNPHCKLEVVRLSLCSVTEEGCALLASSL
NSNPSHLRELDLSYNYPGDSGVKLLNAVLEDPHCQLEKLSVECCAEFRIRPGPQRYACEL
TLDPNTAHKELSLSEENRKVTRGKEQPFPDHPERFDYWRQVLCREGLDGRCYWEAECSGR
ALMGVSYRGISRRGEGHDCWLGRNAVSWSLNCSNDSYTAWHNDKSTGITTPSVSNRVGVY
LDWPAGTLSFYSVSSNTLTHLHTFHSTFTEPLYPGFRLGWVDSSVSLCQVE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatctgttcctgacctgctactggctattctagaggagctggtaggaaacgat
ctgaagacatttcactggtacctggctcagagtgtaccagatggctttcctctcatcccc
aagggccatctggagaacgctgacaggcaggacaccgtggatacgatggtgaacacctac
ggccacgatgtagctatgaagatctcactggagatcctgaggaagatgaaccagaaggac
ctcagcaaaacgttaacagtggatcagcaagaggctgaggttgaggtagcagctgcctca
attcgggttccagactctcctgtctacatcacttgtacagctcagactggcggccatgtt
gtggccccttcgctctccggctgccatatcggtggtccagttcacttcaacatcagagtc
aactcattagacgaagatcccatagttccatctcaagcttcacctgcccattttaccatg
tttccacctgaacctgagaatacagaagacaatgatgaacgaatcgagagttgtcaaaag
aaactcaaacacaatctgcacagtaggttcgtcagtgtgtttgagggactggccagccac
gggaacagaaaacttctcaaccagatctacacagagctctacatcacagaggctggaagt
actgaggtcaatagtgaacatgaggtgagacagattgagacggcatccagaagaacagcc
atacaagaaacaccaatccaatgcaacgacatctttcagcccttccttgatcaatccatc
agaactgtgctgacgaagggagtcgctggcatcgggaaaaccgtctcagtgcataagttc
attctggactgggcagatggaaaagccaatcaaaatctccagttgatattccctctttca
tttcgagagctgaatttggtcagaaagaaaagatgcagtttgatcgaacttctcaatggc
ttttttacggaaacaaaagaaaccgagatatcaaactacgacaattatcaggtgctgttt
gtctttgatggtctggatgagtgtcgacttcctctagacttccagaacaatgacattctc
tttaaaataactgagtcaacctcagtggatgtgctgctaacgaacctcatcaaggggaat
ctgcttccctccgctcaactttgggtaaccacccgacctgcagcagccaatcaaatcccc
cctgagtgtgttgacaaggtgacagaggtaagagggttcaatgacccacagaaggaagag
tacttcagaaatagaatcagcgatgagaacctggccagcagaatcatcacacacataaag
acatcaagaagcctctacatcatgtgccacattcccgtcttctgttggatctcggccatt
gttctggagagaaagctggagaaagcagggagtggagagatgccaaagaccctgactcag
atgtactcacacttcctggcttttcaggagaaagacatggatctcaggcttcagggaaga
ggaacacctgaccctgactggatgagaaagagcatcatgtccctgggaaaactggctttc
caacaactggagaaaggcaacctgatcttctatgaggaagacctgagagagtgtggcata
cacatcggccaggcatcggtgtactcaggagtgtgtactgagatcttcagcgaggaactg
accttatgccagggaaaggtgttctgctttgttcatctcagtattcaggagtttctggct
gccctgtatgtgtttctcacattcatcaacgacaacgtgaatctattagccaaacagcaa
tcatttctgagacgttttccattcggaaattcatcctcaaccagcttctacaaagcagca
gttgacaaggctttacagagtgagcatggacacctggacctgttcctccgcttccttctg
ggcctctcactggagtccaatcagattctcctacgaggcttgctaactcagaaaacaagt
agatcacagaccaacaaggaatcagtcaagtacgtgaaggagaagatcaaggagaatccc
tctccagagagatgcatcaatctgttccactgtctgaatgaactgcatgaccattctcta
gtggaggagatccaaagctacctgggctcaggaactctctctagggccaaactctcacct
gcacagtggtcagctctggtctttgtgttgctgacttcagaagaggagctggatgagttt
gagctgaagaaatactccagatcagaggagggtcttctgagactgctgccagtggtcaaa
gcctccagaacagccctactgaatcgatgcaaactcacagagagatgctgtgaagcgttg
gcctcagcactcagctcacactcctcacaccagagagagctggacctgagtcacaacgac
ctacaggattcaggagtgaagcttctctctgctggactggcaagtccacagtgtaaactg
gaaacgttaagactgaggcgatgcaaactcacagaaagatgctgtgaagcgttggcctca
gctctcagctcaaactcttcacacatgagagagctggacctgagtgacaacaacctgcag
gattcaggagtcatgctgctctcggcaggactgggcaatccgcactgtaaactggaggtt
gtaaggttgtcactttgtagtgtcacagaggaaggctgtgctttgctagcctcctctctc
aattccaacccctcacacctgagagagctggacttgagctataattacccaggagactcg
ggagtgaagcttctcaatgctgtactggaagatccacactgtcaacttgagaaacttagt
gtggagtgctgtgctgagttcaggatcagaccaggaccacagagatatgcctgtgaactc
acactggacccaaacacagcacacaaagagctctcgctgtctgaggagaacaggaaggtg
acgcgagggaaagagcagccgtttcctgatcacccagagagatttgactactggaggcag
gtgctgtgtcgggaaggtctggatgggcgctgctattgggaggcagagtgtagtgggagg
gccctgatgggagtttcttacagagggatcagcaggagaggagagggacatgactgctgg
ttgggacgaaacgctgtgtcctggagtctgaactgctctaatgacagttacacagcctgg
cacaacgacaagagcactggcataaccaccccctctgtctctaacagagtaggagtgtat
ctggactggccggccggcactctgtccttctacagtgtctcctctaacacactgacccac
ctgcacacgttccactccacgttcactgagcccctctatccagggtttaggctaggctgg
gtggactcgtccgtgtccttgtgtcaggtagaatag
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