Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368070
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Entry
139368070 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin polyglutamylase ttll6
KO
K16582
tubulin polyglutamylase TTLL6/13 [EC:
6.3.2.61
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139368070
04812 Cytoskeleton proteins [BR:
ocla04812
]
139368070
Enzymes [BR:
ocla01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
139368070
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
139368070
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
139368070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
139368070
NCBI-ProteinID:
XP_070962714
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All DBs
Position
16:complement(17656896..17673902)
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AA seq
865 aa
AA seq
DB search
MTAGLEFAKRHLKDSQTMRNEVLWSDETKTELLGLNAKRHVWKNPGTIPKGKHGGGSVML
WGCFSMAGTGRLVKIEEKMNGVKNGEILDENLLQSAQDLGLGXRMDLRAESPDKDSEDDA
FKCGPEGGEEGEGWGSDSQPEACTPTPPSAGKRKKKRKKRYGLWEAVEGEDWTLFWTDCS
VSLDRVMDMKRYQKINHFPGMSEICRKDLLARNMNRMLKLFPKDYNIFPRTWCLPADYSD
FQAYTRSKKHKTYICKPDSGCQGRGILLTKSSKDIRPGEHMICQVYVSRPFVIDGFKFDL
RIYVLVTSCDPFRIFLYNEGLARFCTTQYNEPSNGNVDDVCMHLTNYAINKHSENFVRDD
DTGSKRKLSTLNKHLEAMCYDTEKMWLDIEDVIIKTLISAHPILKHNYHTCFPNHAAGSA
CFEILGFDVLLDHRLRPWLLEVNHSPSFTTDSRLDREVKDSLLYDTLVLINLGACDRRKI
TEEEKRRVKERLQQNRSREARSEELRQSQAASVEQMRRYEAKHLGGFRGIYPREGGEKYE
KYFKHSSSLFQETAASKAREECARQQLQELRLKQEQKEREQKGSRRRDLQGESAGERAKP
HRVQVRQTNSQQLLTMPLLPTATNGSPMVQDLSDEEVERVSGLLQRESLLRDLGVVDQIY
KLLQGRGQSMPNGITPPREQNELPLHRHERANKLDSLTEFSWRPKRHCTVIQHQLPPGAK
PCRQYVHSQLLQQRWPWPSLDRGPTHTESACLQYYTPEDHVLETVRRAPGDLRRTNSAQR
IPWTINGARQGSMSSSYAESKARATVSNISQLTPGRLHCTPMSSDPKALQSLFVISTPAL
LIQRPEFPHPIRKPLRKVPQHGQGR
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgacagccggcttggagtttgccaaaaggcacctaaaggactctcagaccatgagaaac
gaggttctctggtctgatgaaaccaagactgaactccttggcctgaatgccaagcgtcac
gtctggaagaatcctggcaccatccctaaggggaagcatggtggtggcagcgtcatgctg
tggggttgtttttcaatggcagggactgggagactagtcaagattgaggaaaagatgaac
ggcgtaaagaacggagagatccttgatgaaaacctgctgcagagcgctcaggacctcgga
ctggggtaaaggatggacctgcgagcagagagccctgacaaagactctgaagatgatgcc
ttcaagtgtggacctgagggaggagaggagggcgagggctgggggagtgatagtcaaccc
gaggcctgcacccctactcctccatccgctggcaagaggaagaagaaaaggaaaaagaga
tatggcctttgggaagcagtggagggcgaggactggactctcttctggacagactgctct
gtttcactggacagagttatggacatgaagcgctaccagaagatcaaccattttccaggg
atgagtgagatttgtagaaaggatcttctggctcgaaacatgaaccgcatgctaaaactc
ttccccaaagactacaatatctttccccgaacatggtgcctaccagcagattatagtgac
ttccaagcttacaccaggtccaagaaacataagacttacatctgtaagccagactccggt
tgccaagggcgaggcatcttactcaccaagtccagcaaagacattcggccgggggaacac
atgatctgccaggtgtatgtctcccggccattcgttattgacggcttcaagtttgacctg
cgtatctatgtgctggtgacctcctgtgaccccttccgcatcttcctgtacaacgagggg
ttggctcgcttctgcactacccaatacaacgagcccagcaatggcaacgtggatgatgtt
tgcatgcatctgaccaactatgccatcaacaagcacagtgagaactttgtccgtgatgac
gacactggcagcaaacggaagctgtccaccttgaacaagcacctggaggccatgtgttac
gacacagagaagatgtggttggacattgaggacgtgattattaagacgctcatctctgcc
caccccatcctcaaacacaactaccacacctgtttccccaaccacgcggccggcagcgcc
tgctttgagatccttggctttgatgtgctactggaccatcgactcaggccctggctgctg
gaggtgaaccactcccccagtttcactactgattcacggttggaccgggaggtgaaggat
agcctgctgtatgacaccctggtccttataaacctgggtgcctgtgaccgccgtaagatc
actgaggaggagaagcgcagggtgaaggagaggctgcagcagaaccgctccagagaggct
aggagtgaggaactgcgtcagtcccaggcagccagtgtagagcagatgcggaggtatgaa
gccaaacacctgggtggctttcgtgggatctacccccgcgagggcggagagaagtacgag
aagtacttcaaacacagcagctccctgtttcaggagactgccgcctctaaggccagggag
gagtgtgccaggcagcagctgcaggagctgcgtctgaagcaggagcagaaggagagggag
cagaaggggagccgtagacgagacttgcagggggagtctgcaggagagagggccaaacca
cacagagtacaagttcgtcagaccaactcccaacagctcctgaccatgccgctcctgcct
actgctaccaacggttcccctatggtgcaggacctctctgatgaggaggtggagagggtg
agtggactgctccaacgggagagtctactgagggacctcggggtggtggaccagatctat
aagctgttgcaggggagaggccagtccatgcctaatggcattacacccccccgtgagcag
aatgagctgcccctacacagacatgaacgagccaataagttggactccctgactgagttc
tcctggagaccgaagcgtcactgtactgtgatccaacaccagttgcctccaggggccaag
ccctgccgtcagtacgtccattcccagctgctgcagcagcgctggccctggcccagtctg
gacagggggcccactcatactgagtctgcctgccttcaatactacaccccagaggaccac
gtcctagagacggtccgccgggcgccaggggacctgaggaggaccaacagtgcccagcgt
atcccatggacaatcaatggtgctcgccagggcagtatgagctcgtcttatgcagagtcc
aaggcccgggccacagtgtcaaacatctcccagctcacgcctggacggcttcactgcacc
cccatgtcctccgaccccaaggccctccagagcctgtttgtcatctccaccccagcccta
ctgatccagaggcccgagttcccccaccccatccgcaaacccttgcgcaaagtcccccag
cacggacaagggcgctag
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