Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368078
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Entry
139368078 CDS
T10872
Name
(RefSeq) male-specific lethal 1-like 1 isoform X1
KO
K13163
male-specific lethal 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139368078
03036 Chromosome and associated proteins [BR:
ocla03036
]
139368078
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
139368078
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MSL complex
139368078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEHE
MSL1_dimer
DUF7791
DivIC
Cluap1
Motif
Other DBs
NCBI-GeneID:
139368078
NCBI-ProteinID:
XP_070962730
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All DBs
Position
16:17712920..17720410
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AA seq
575 aa
AA seq
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MTMRSTLFANAGFKLDTEILDFDKSQVGTANVVNSITIKRESCDFVIDVHDVHGAIHKTG
GELLSKTKLLDQNYIIRTPVAAQNKAEGALVQGDNWGSTGVLSSSGRQMGGEGIPIKGKL
ILSDSMDNTELVSNNNSKDAGTDESTRGVSTGGVVNTASIELSTEGKWRNIRKTPANPHT
QATCLQQILLLQLDLIEQQQQQLQSKDKEIDELKADKETLLARIERMERRLQLTRKDPRD
KRLFQPLEPWTPDKEDLWDLEVGDSPQTPTPRSLPFSRGDKGLKRKFCFLDSKIQKSRGG
KGSKFAPSKSECGAGSPHQRELRNKETPEKTGFGRSAVEGGTLQSSNEDPELTARMEELP
FMSTTEMYLCRWHQPPPSPQREPSPSPKKEEVVAIPSWRENIMEPLDEEAASVIPEMLED
SVFLKRHAKLELDEKRRKRWDIQRIREQRMFQRLQQRMNKKKGIQESEPEVSSFYPDTED
VESIIITPFLPVVAFGRPLPKLTQQWYHGAGGGAGRVSQKDLSSKCKYLFFPISMSFKLS
KLNICHPKHSSQSQSFSCLFCPLFLKKMFYKNRLI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgactatgagatcaactttgtttgctaatgcaggatttaagctggacacagagatactt
gactttgacaaatcacaagtgggaactgcaaacgtcgtgaattccataaccatcaagaga
gaatcctgtgactttgtcattgatgtccatgacgtacatggggcaatccacaagactgga
ggggagctcctcagcaaaacaaagctcctagaccagaattacatcattcggaccccagtg
gctgctcaaaataaagcggaaggggcactggttcaaggcgacaattggggaagcaccggg
gtgctgtcatcttccggcagacaaatggggggtgagggaatcccaattaaaggtaaactc
attctgagtgacagtatggataatacagagttggtttcaaacaataactccaaggatgct
ggtactgatgagagcaccagaggggtctccactggaggagttgtcaacactgcatccatt
gagctcagcacagagggcaagtggaggaacatcaggaaaacccctgctaacccccacaca
caggccacctgcctccagcagattctcctgcttcagctggacttgattgaacaacagcaa
caacagctgcagtccaaggacaaggagatagatgagctgaaagcggacaaggagacgttg
ctggcgcgtattgagcgtatggagcgccgtttgcagctgacgaggaaagacccacgtgat
aagcgcctatttcagccgctagagccctggaccccagataaagaggacctgtgggatcta
gaagtgggtgacagcccccagactcccacccctaggtcactccccttcagccgaggagac
aaaggcctcaaaaggaaattttgcttcctggactccaaaatccagaagtcacgagggggc
aaaggctccaagttcgccccctctaagtcagagtgtggagctggctctccccatcagagg
gagctgcgcaataaagagaccccggagaagacagggtttggtcggtcagcggtagagggg
ggtactctgcaatcgagcaatgaggacccggagctcaccgctcggatggaggagctccct
ttcatgtctactactgagatgtacctgtgtcgttggcatcagcctcccccctccccccag
cgcgagccatccccatccccaaagaaagaggaggttgtggccatcccctcttggagggaa
aacattatggagcccttggatgaggaagctgccagtgtcatcccagagatgttggaagac
agtgtctttttgaagcgccatgcaaagctggagttggatgagaagaggagaaaaagatgg
gacattcagcgtatccgcgagcagcgcatgtttcagcgtctgcagcagcgcatgaacaag
aagaaggggatccaggaaagtgagccagaggtctcgtcgttttacccggacactgaagat
gtcgagtccataatcatcacccctttcctgcctgtggtggcctttggccggccattgccg
aagctcactcaacaatggtaccatggtgcaggtggcggggcagggcgagtttcacagaaa
gacctttcatcaaaatgcaagtatttattcttccccataagtatgtcttttaagttaagt
aaactgaacatttgtcacccaaaacactcgtctcaaagtcaatcattttcttgcctattc
tgtcctctgttcttaaagaagatgttttacaaaaacaggttaatatga
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