Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368082
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Entry
139368082 CDS
T10872
Name
(RefSeq) syntaxin-4
KO
K13502
syntaxin 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
ocla04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139368082
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
139368082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139368082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139368082
Membrane trafficking [BR:
ocla04131
]
SNARE
Syntaxin (Qa)
Stx-PM
139368082
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139368082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
K-box
ABC_toxin_N
Med9
COG5_N
DUF1798
Motif
Other DBs
NCBI-GeneID:
139368082
NCBI-ProteinID:
XP_070962738
LinkDB
All DBs
Position
16:complement(17770832..17778104)
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AA seq
296 aa
AA seq
DB search
MRDRTKELGNTAEVSDEDEEGRALMIKPGTSTVREEKENDAFFKKVQEIREGLETLKKVV
SDLENKQKTVLGVALPEDGMKRELQTLREQIKTMAMQIHKKLKIIEPKKGEDDGKYIPIN
LRMQRAQHGVLSREFVELMGHCNTIQASYRDRNVERIQRQLRITGTNVTDEELDVMLESG
QTDVFTQNILIDAKATKQALNEIESRHDEILKLERSIRDLHDMFQYLAMEVEAQGEMVNR
IEANVLNSTDYVQKAVVETEKAATYQNKARKKKIWIALCCAILLLILAISLAITFS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccgaaccaaggaactgggcaatactgccgaggtgtcagacgaggatgaagag
ggcagggcacttatgatcaaaccagggacttctacagtgagggaggagaaggagaatgat
gcatttttcaagaaggtccaagagattcgagagggactggagacgcttaaaaaggtggtt
tctgaccttgagaacaaacagaagaccgtgttgggtgtggcactgccagaggacggcatg
aaaagggaactccaaacccttcgggaacagatcaaaacaatggcaatgcagatccataag
aaactgaagatcattgaacccaagaaaggagaagatgatgggaaatacatccccataaac
ctaaggatgcagagagcccaacatggcgtcttgtctcgggagtttgtggagttgatgggc
cactgtaacaccatccaggcttcctacagagatcgcaacgtggagaggatacagaggcag
ctcagaatcactggcaccaatgtaacagatgaagagttggatgttatgcttgaaagtgga
cagactgatgttttcacacagaatatcctgatcgacgctaaagccactaagcaggcgctg
aatgaaattgagtcccggcatgacgagatcctcaaactggaaaggagcatcagggatctg
catgacatgttccagtacctggccatggaggtggaggctcagggggagatggtcaaccgc
attgaagccaacgtcctcaactcaactgattatgtgcagaaggcagtggtggagaccgag
aaagctgccacctaccaaaacaaagcacgcaagaagaagatatggatcgcgttatgctgt
gccattctcctcctcattttagccatctcattggcgatcaccttctcctga
DBGET
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