Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368087
Help
Entry
139368087 CDS
T10872
Name
(RefSeq) medium-chain acyl-CoA ligase ACSF2, mitochondrial
KO
K23617
medium-chain acyl-CoA ligase, mitochondrial [EC:
6.2.1.2
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ocla01004
]
139368087
Enzymes [BR:
ocla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
139368087
Lipid biosynthesis proteins [BR:
ocla01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
139368087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-GeneID:
139368087
NCBI-ProteinID:
XP_070962752
LinkDB
All DBs
Position
16:complement(17921588..17952477)
Genome browser
AA seq
607 aa
AA seq
DB search
MFSRIAFGSQPLRSNVFFSKPVKLLQKPRTTFPSQGSCAVHVDSPPTIPTLTTSYAHGTS
SKSLLFSTVGGSLQASAERFPDREAVVFLQDGVRKTFSQLQQDVDQAAAGLLALGLKRGD
RLGMWGPNTYEWVLFQFASAKAGIILVSVNPAYQVQELEFALRKVGCNAIVCPTQFKTQK
YCDMLRQICPEMDTAIPGSVKSARLPDLHTVIVTDSRQPGMYHLEDVMQAGSSQHMQQLE
ELQKKLSFDDPINIQFTSGTTGNPKGATLSHHNIVNNAYFIGMRLGYDWRSQVRVCLPVP
MYHCFGSVGGGIVMATHGITLVSPSTGYDGRANLAAMESERCTFVYGTPTMYIDMLGQPD
LAKFDLSSVEGGIMAGSPCPPEIVKKVISTMGIKEFVIAYGTTENSPVSFCGFPTDNLER
KSETVGCIASHIEAKVVDPGSGQLMPLGISGELMIRGYCVMLEYWGDVAKTDECIAKDRW
YKTGDIASLDKYGFCRIEGRIKDMIIRGGENIYPAEIEQFLHTHPKVQEAQVIGIKDERM
GEEVCACLKLKAGQDCSAEDIKAYCKGKIAHFKIPRYVTFVNDYPLTVSGKIQKNKLREQ
TEKFLAL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgaggattgcatttggctctcagcctcttcggtcgaatgtatttttttccaag
ccagtaaaacttttgcaaaaaccaaggacaacttttccttcacaaggcagttgtgcagtc
catgtggacagtccacccactatccccacacttaccaccagctatgcccatggcacctcc
tccaagtctctactcttcagtacggtcggtgggagcctccaggcttcagctgaacgcttt
ccagaccgggaggctgtagtgttcctacaggacggggtcaggaagaccttctcacagctc
cagcaggatgtggaccaggctgctgcaggcctcctggcactgggactgaagaggggggac
cgactgggcatgtggggacccaacacatatgagtgggtcctgttccagtttgcctcagcc
aaggctggcatcatactggtgtctgtgaacccagcctatcaggtgcaggagttggagttt
gctttgaggaaggttggatgcaatgccattgtgtgcccgacccagtttaagacccagaag
tactgtgacatgctcaggcagatctgtccagagatggacactgctatcccaggatcggtc
aagagtgccagactccctgacctccacacagtgatcgtgacagacagccggcagccgggg
atgtaccacctagaggacgtgatgcaggcagggagcagccagcacatgcagcagctggag
gagctgcagaagaaactgtccttcgacgaccccatcaatattcagttcacatcgggtacg
acggggaaccctaaaggtgccaccctctcccaccacaacatcgtcaacaatgcctacttc
attggcatgcgacttggatatgactggaggtctcaggtacgcgtgtgcctgcctgtgccc
atgtaccactgcttcggctcggtgggtggtggcattgtcatggccacgcatggcatcacg
ttggtctctccctccactgggtacgacggacgtgccaacctggcagctatggagagtgaa
aggtgtacctttgtctatggcactcctactatgtacatcgacatgttgggccagcctgac
ttggccaagtttgacttgtcgtcagtggagggaggcatcatggctggttccccgtgtcca
cctgaaatagtgaagaaggtcatttctaccatgggcattaaggagttcgtaattgcctat
ggaaccacagagaacagccctgtgtcattctgtggcttcccaacagacaatttggagagg
aagtcagagactgttgggtgcattgccagtcacatagaggctaaggtagttgaccctggc
tctggtcagctcatgcctctcgggatatcaggagagctgatgatcaggggctactgtgta
atgctggagtactggggggatgtcgccaagacagacgagtgcattgccaaagaccgctgg
tataagactggtgacatcgccagcctggacaagtatggcttctgccgcatcgagggtcga
atcaaggacatgatcatccgaggaggggagaacatatacccagctgagattgagcagttc
ctacacacccaccctaaagtccaggaggcacaggtgattggaataaaggatgagcgtatg
ggagaggaggtgtgtgcctgcctcaagctgaaggcgggacaggattgcagtgcagaggac
attaaagcttactgcaagggaaagattgctcatttcaagatcccacgctatgtaacattt
gtgaatgactatccgctcacagtttcaggaaagatccagaagaacaaactgcgtgagcag
acagagaagtttctggcactgtga
DBGET
integrated database retrieval system
