Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368099
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Entry
139368099 CDS
T10872
Name
(RefSeq) PDZ domain-containing protein 7-like isoform X1
KO
K21882
PDZ domain-containing protein 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139368099
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139368099
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
USH complex and associated proteins
139368099
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
139368099
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139368099
NCBI-ProteinID:
XP_070962768
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All DBs
Position
16:18254246..18268367
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AA seq
891 aa
AA seq
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MAHSSDPSRRDAAPGTQRSGTATHHLLRKQQQRRGIRSSSPMGRVILINSPVDGGDDSED
IHTVTVDKSEDGRLGFSVRGGSEHGLSIFVSKVEDNSSAEQAGLCVGDKLVEVNGVSLES
ITMSSAVKVLTGNNRLRMVVRRVGKVPGIRYSKEKTTWVDLIHGRMVVEESGRTPSASVA
SSDGALRRIIHIYTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLGERNGINMGDQILAA
NGVSFEDISHSSAVEVLKSHTHIMLTIKEAGRYPAYKEMVAEYRWLNKLASGNGTRQSSS
QGSDSNSSASSLSSGTPISSLSGLSQVMFPPSLPFGMDMVDVCISTEDQMSGSGQCTDTA
IQTDPSPHRMGADTSHSLGATTLLQDSVIRGEGGRGRGESPKTAVLMALSRPSQPIHRSQ
SQVTVAEVKQTKQRKQQKGGKNPERSTLQRSKTFVNLLFRGRRRDTSKGRSKSPPKSGAG
GDGERRRRPSGPDPEMLGVVEGMARRLLSEDEVASVMKTCRRYITERVVENLVRHLLAVL
DRPEKLLLLREIRMLLPPADLGLFNNMVVPFEVEAYDILKYRSVRSPLLRSPQSGRAPRR
HLITPIPDFQGGFELHSAQEVERESQLLEELERLRLSASQSPRQQHTHTSRAFPPLLDVP
VDGYASSNSLRPLSVSPLLPNWLLAHSNTTDPHSPLRGHSGTVRSVHFDVSMDQGDTISE
RGRSPFRNGTSKGKKEKETVFTLQSAPRRSRPPLSQVFGSGLDADFTAEGLGRERVNGHP
SSSENGLNGSASVIEYEFKTVSISKTKQSLGISISGGMESKVQPVVKIEKIFPGGAASTC
EVLKAGFELVSVDGVSLQGVTHPHAVEIIRRAFSNKAKDPMVFIVKVPKSP
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcgtcagacccctcccgcagggacgcagcccccgggactcagaggtcaggc
acggctacgcaccacctcctccggaagcagcagcagcgccggggaatccgatcttcctcc
cccatgggccgggtcatcctcatcaactctcctgtggacggtggagatgacagtgaggac
atccatacggtcacagtggataagagtgaggacggcaggctgggcttcagcgtgcgtgga
ggctcagagcacggcctcagcatctttgtcagcaaggtagaggacaacagctccgcagag
caggcaggcctgtgtgtaggggacaagctggtggaagtgaatggggtgagcttggagagc
atcactatgagcagtgcagttaaagtcctgacagggaacaacagactgaggatggtggtg
agacgtgtgggcaaagtacccggtatccgctactccaaagagaagacaacctgggtggat
ctgatccacggtaggatggtggtggaggagagtgggcgtacaccctccgcctcggtggcc
agctcagatggggccctgcggaggatcatccacatctacaccacctcagatgactactgc
ctgggcttcaacatccgagggggcaaggagttcggcctgggcatctacgtctccaaattg
gatcctggcggtctgggtgaacggaacggcatcaatatgggcgaccagatccttgcggcc
aacggcgtaagctttgaggacatcagccacagcagtgccgtggaggtgctgaagagccac
acacacatcatgctgaccatcaaggaagcgggacgataccctgcctacaaggagatggtg
gcagaatacagatggcttaacaagttggccagtggcaatgggactcggcagtcttcctcc
cagggctcggactccaactcctctgcctcatccttgtcctctgggactcccatctcctct
ctgagcggactgtctcaggtcatgttcccccccagcctgcccttcggcatggacatggtg
gacgtctgtatctctactgaggaccagatgtctgggtctggccagtgcactgacaccgcc
atccagaccgacccctcgcctcacaggatgggtgcggacactagccacagcctgggggcc
accaccctcctgcaggactcggtcatccggggggagggaggcagggggagaggagagtcc
cccaaaacggccgtcctaatggccctcagtagaccgagtcagcccatccatcgctcccag
agccaggtcactgtagcagaggtgaagcagacgaagcagaggaaacagcagaaaggaggg
aagaatcctgagaggagcaccctacagcgctccaagacctttgtcaacctgctgttcagg
ggtcgcaggagagacacctccaaggggcgctccaagtccccccccaaatctggggcaggt
ggagatggggagcgcaggcgcagacccagcgggccggacccagagatgctgggggtggtg
gagggcatggcccgcaggctgctgagtgaggacgaggtggcctccgtcatgaagacctgc
cgacggtacataacagagcgtgtggtggagaacctggtgcgccacctgctggccgtgctg
gaccggcctgagaagctgctgctgctgagagagatcagaatgctgctgcctccagctgac
ctagggcttttcaacaatatggtggttccattcgaagtggaggcctatgatatcttgaag
taccgttctgtcagatccccacttctgcgctccccccagtctggacgagcccccaggcga
cacctcatcacccccattccagacttccagggtggctttgagctccacagtgcccaggag
gtggagagggagagccagctgctggaggagctagagcggctgcgtctgtctgcgtcccag
agtccccggcagcagcacacccatacctccagagcattcccccccctgctggacgtccca
gtggatggctacgcctcctcaaactccctccgtcctctctccgtcagccccctgctcccc
aactggctgctggcccacagcaataccaccgacccccactccccgctacgaggacacagt
ggtacggtccgctccgtccactttgatgtgtcaatggaccagggagataccatctcagag
cgggggaggtctcccttcaggaatgggacttccaagggtaaaaaggagaaagaaactgtg
ttcactctgcagagcgctcctcgacgcagcaggcccccgttgtcccaggtgtttggctct
ggcctggacgctgacttcacagcagaggggttgggaagggagcgggtgaacggtcatccc
agctcctctgagaatggcctcaatggcagcgcttcggtcatagagtacgagttcaaaacc
gtcagcatctccaagactaagcagtcactggggatcagtatctctggtgggatggagtct
aaggtgcagccggtggtgaagatagagaagatcttcccaggaggagccgcctccacgtgt
gaagtcctgaaggctggatttgagctggtgtcagtggatggagtgtccctgcagggcgtg
actcacccccacgctgtggagatcattcgcagggctttcagcaacaaggccaaagacccc
atggtgtttatagtcaaagtccccaaaagcccttga
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