Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368113
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Entry
139368113 CDS
T10872
Name
(RefSeq) junctional adhesion molecule A-like
KO
K06089
junctional adhesion molecule 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04517
IgSF CAM signaling
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139368113
04517 IgSF CAM signaling
139368113
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139368113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139368113
04090 CD molecules [BR:
ocla04090
]
139368113
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
CTX family
139368113
CD molecules [BR:
ocla04090
]
Proteins
139368113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
V-set_CD47
Zwei_Ig_N
Ig_C17orf99
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
139368113
NCBI-ProteinID:
XP_070962793
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All DBs
Position
2:42986259..43005303
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AA seq
295 aa
AA seq
DB search
MFVSGLVSVLLFFHATGVEAFMVTTKNPNVRAKENEGADLYCTPSADFGADARVEWKFKD
MKGSTTYVIFDGKPTTLYEGRVTKFDGMLRFSKVTRKDNGQYQCEVSNKQYVGDVNVNLT
VLVPPSVPMCRIPTSVTTGHRVLLSCHDAEGSPSPTYKWYKDKTPLPENPSQFPAFKNYT
YKINPLNGNLEFPSALVIDTGNYSCEAMNDAGPVQRCQAVRMEVRNINTGGIVAGVIVAL
LALALLCFGLWYAHRKGYMPKKSESKPKPSVVYQPTSESGDEEDGEFRQKSSFVV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcagcggcttggtttcggtgttactattctttcatgcaacaggtgtagaggcc
ttcatggttacaaccaaaaatccaaacgtgagggctaaagagaatgagggggctgatctt
tactgtactccctcggctgactttggtgcagatgccagagttgagtggaagtttaaggac
atgaagggttctacgacctatgtcattttcgatgggaaacccaccacactttatgagggc
cgtgtcaccaagtttgatgggatgctgaggttcagcaaggtgacgcgcaaagataacggg
cagtatcaatgtgaggtgtctaacaaacagtatgttggggatgtcaacgtgaatctcact
gttttagtacctccatccgtgcccatgtgtaggatccctacctctgtgacgacggggcat
cgcgtgctactgtcctgtcatgatgcagaggggtctccttcccccacctacaagtggtat
aaggacaagacccctcttcctgagaaccccagccagttccctgccttcaagaactacacc
tacaagatcaatcctctcaatggcaacctggagtttccctctgctttggtgatagataca
ggaaactacagctgtgaagctatgaacgatgccggccctgttcaacgctgtcaagctgtg
aggatggaagtccgcaacatcaacactggaggtattgttgctggggtgatcgtggctctc
ctggccctggccctgctgtgcttcggactgtggtacgcccaccgcaaaggatacatgccc
aaaaagagtgaaagcaaacccaaaccctcagtggtctaccagccaacatcggagtccggc
gatgaagaagatggggaattcagacagaagtcgtctttcgtggtatag
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