Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368130
Help
Entry
139368130 CDS
T10872
Name
(RefSeq) vesicular glutamate transporter 1-like
KO
K12302
MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6/7/8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139368130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139368130
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC17: Vesicular glutamate transporter
139368130
Major facilitator superfamily (MFS)
Organic acid transporters
Anion:cation symporter (ACS) family [TC:
2.A.1.14
]
139368130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
Motif
Other DBs
NCBI-GeneID:
139368130
NCBI-ProteinID:
XP_070962815
LinkDB
All DBs
Position
16:19523979..19546649
Genome browser
AA seq
581 aa
AA seq
DB search
MEIRPDRFKIVAGQTLGKLHKILEKRQENGETIELTDEGQAVIVEEKEMPVVDCTCFGLP
RRYIIAILSGLGFCISFGIRCNLGVAIVSMVNNQTIYKGDKPILVKAQFNWEPETVGMIH
GSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSCLNMLIPSAARTHIACVILVRICQG
LVEGVSYPACHGIWAKWAPPLERSRLATTAFCGSYAGAVIAMPLAGVLVQYSGWSSVFYV
YGSFGIFWYLFWILVSYESPAAHPTITEQERKYIEEAIGMSAANSTPVTKWNTPWRAFFT
SMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLVMTIIVPIGGQ
LADYLRTNKIMSTTNVRKMMNCGGFGMEATLLLVVGFSHTKVVAITFLVLAVGFSGFAIS
GFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKTREEWQYVFLIAALVHY
GGVIFYGLFASGEKQWWAEPEQLSDEKCGILDEDELANETEELYRTSGEGGYGATIQAQD
PNGGGGGAGTWVSDWDKTEELVQPPGTNSYLYGGEEDKELT
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggagatacgaccagataggtttaaaatcgtcgcgggccagaccctcggaaaattacac
aaaatcctagagaagcggcaggaaaatggcgagaccatcgagctcaccgatgagggccag
gcagttatcgtggaggagaaggagatgcccgtggtggactgcacctgcttcggcctgcca
cggcgctatatcatcgccatcctttccggcctgggcttctgcatctcttttggcatccga
tgcaacttgggcgtggccatcgtcagcatggtcaacaaccaaaccatctacaagggcgac
aaacccatccttgtgaaagctcagttcaactgggaaccagaaacagttggaatgatccat
gggtcatttttctggggatacatagtaacccaaatacccgggggattcatctgtcaaaaa
tttgcagccaacagagtctttggctttgccatagtggctacctcatgcctgaatatgttg
atcccttcggcagcacgaactcacattgcctgtgttatccttgtcaggatatgtcaagga
ctcgtggagggtgtttcatacccagcgtgccacggtatctgggcaaaatgggccccacct
cttgaaagaagtcgattggccacgacagccttttgtgggtcctatgcaggagccgtgata
gccatgccactggctggagtactagtccagtattcagggtggtcatctgttttctatgtc
tatggcagctttgggatcttctggtatctcttttggatcctggtgtcgtacgagagcccg
gcagcccaccccaccatcacagaacaggagcggaaatacattgaggaggctattggaatg
tcagccgctaactctacacctgttacgaaatggaacacgccttggagagcctttttcact
tcgatgccagtctacgccatcatcgtggccaatttctgtagaagctggaccttctacttg
ctcctcatcagccaacctgcatactttgaagaagtgtttgggtttgagatcagcaaggtg
ggcttggtgtcggctctcccccatctggtgatgaccatcatcgtgccgatcggtggccag
ctggctgactacctgcgcacaaacaaaatcatgagcaccaccaacgtccggaagatgatg
aactgcggaggtttcggaatggaagccaccctgctgctagtggtcgggttttctcatacg
aaagttgtggctatcacctttttggttctggctgtgggcttcagtgggttcgctatttca
ggcttcaatgtgaaccacctggacattgctccccgctatgccagtatcctcatgggcatc
tccaacggggtgggcactctgtctggcatggtgtgcccgctcattgttggtgccatgacc
aaacataagacgcgggaagagtggcagtatgtgtttctcattgctgcactcgttcattac
gggggtgttatattctacggactttttgcctccggagaaaagcagtggtgggcagagccc
gagcaacttagcgatgagaagtgtggaattctggatgaggatgagctggccaatgagaca
gaggagttgtaccgtactagcggagaaggaggctacggagcaacgatccaagctcaggat
cccaacggaggaggaggaggcgcaggaacctgggtctcggactgggataagactgaggag
ttagtacaaccaccaggaaccaatagctacctatacggaggagaggaagacaaggagcta
acatag
DBGET
integrated database retrieval system
