Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368143
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Entry
139368143 CDS
T10872
Name
(RefSeq) tubby protein isoform X1
KO
K19600
tubby and related proteins
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139368143
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139368143
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139368143
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
Tubby family proteins
139368143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
Motif
Other DBs
NCBI-GeneID:
139368143
NCBI-ProteinID:
XP_070962834
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All DBs
Position
16:19756829..19766600
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AA seq
562 aa
AA seq
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MEDPELRQLKLDNQRSLLMKKQQRRRADTQMVTANRDARPKKSKQKTGADDTDLLITQSQ
SNNSLNAEEAHDNPLEEITLGELSLKTTDATDEMPPEKPIIAKTMDVEIDSQPKPKLSTE
NEGPAEVKKKEKEKKEKGVKKEKAQAKQLEQNEDKGEEKEKEKEKREKKTKKDKLKGHTP
SKEKKNKTDEQEANTITKSPAIQIDSVVEFETPEWDSDGERKDWSKSPIPGTPKKKQHLN
TSRCQISDNEREEDEILEREKKEKTPKKTKKAEKANLALLNSNYRQQDTSDSDDNIGRVT
TPVSVEDLEKFALHPAPRDTTILCRITRDRRGVEKGMYPTYYLHMEKEDGKRVFLMAGRK
RKKCKTSNYLISIDPTELSRDTDSYIGKLRSNVLGTKFTVFDDGDNPDKKPFVKECESVR
QELAAICYEKNVLGFKGPRKMTVVIPGMMENDERVCIRPKSDIESLLSRYENGNTDNLVC
LMNKSPSWNEQTQSYVLNFHGRVTQASVKNFQIVHPDNEDYIVMQFGRVAEDVFSMDYSF
PMCPLQAFAITLSSFDGKLACE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccagaattgcgtcaactaaagctggacaatcagcgttcacttttgatgaag
aagcagcagagaaggagggccgatacccaaatggtcacagccaatagggacgctcgaccc
aagaaaagcaagcagaagactggagcagatgacacagacttgttgattactcaatcccag
agcaacaactccttaaatgctgaagaagcccatgataacccactggaggaaattactctg
ggagagctcagcctaaaaaccactgatgctacagatgagatgccccccgagaaacccatc
atcgccaaaactatggacgtggaaattgacagccagccaaagcctaaacttagtacagaa
aatgaaggcccagcagaagtgaaaaagaaagagaaggagaagaaagagaaaggtgtgaaa
aaggagaaggcgcaagcaaaacagttagaacagaatgaggataagggagaggagaaagag
aaagagaaggagaagcgagagaaaaaaacaaaaaaggacaaattgaaaggacacacccca
agtaaagagaaaaaaaacaagactgatgaacaagaggcaaacactatcactaagtctcca
gctattcagatagattccgtagtagagtttgagacgccagaatgggacagtgatggtgag
agaaaggattggtcaaaaagcccaatcccaggaacacccaagaaaaaacaacacctcaac
acatcaaggtgccaaataagtgacaatgagagggaggaagatgaaattcttgaaagagag
aaaaaagagaaaactccaaaaaagacaaaaaaagctgagaaagccaatctcgcactgctt
aactccaactacaggcagcaggacacctcagacagcgacgacaacattggaagagtgaca
actcctgtctcagttgaagatcttgaaaagtttgccctgcatccagcccctagagataca
acaatcctgtgcagaatcactcgggacaggcggggcgtggagaaaggaatgtaccccact
tactatctccatatggagaaggaggatgggaagagggtgtttttaatggcaggcaggaag
aggaagaagtgcaaaacctccaattatctcatttccattgatccaacagaactttccaga
gacacagacagttatataggcaaactaagatcaaatgtgctaggcaccaaattcacagtg
tttgacgacggggataacccagataagaagcctttcgtcaaagagtgtgagtcagttcgg
caagagcttgccgcaatctgttatgagaagaatgttctaggtttcaaaggccccaggaaa
atgacggtggttattcctggcatgatggagaatgatgagagagtgtgcattcgtccaaaa
agtgatatagagtctctgctctcccgctatgagaatggtaacactgacaacctagtgtgc
ctcatgaacaagtcccccagctggaatgaacagacacagtcctacgtgctcaatttccac
ggccgagtcacacaggcctccgtcaaaaacttccaaatcgttcaccctgacaacgaggac
tacattgtgatgcagtttggtcgggtggcagaggacgtattctccatggactatagcttc
cctatgtgtcccctgcaggccttcgccatcacgctctcctccttcgatggcaaactggct
tgtgagtga
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