Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368159
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Entry
139368159 CDS
T10872
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Pattern recognition receptors [BR:
ocla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139368159
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Other DBs
NCBI-GeneID:
139368159
NCBI-ProteinID:
XP_070962861
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Position
16:complement(20150467..20172773)
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AA seq
1135 aa
AA seq
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MERNTHYNSILDRNKRIAWQEDCYVDLQSTLTSTSTKGEMEDVGWIQKHQGHLQRFITTP
LLEGALSHMRKLELLSQGEEAQVQAGGQLQERVGTLTSILASMDPQGSNALQAYLENSDS
QMYRLITMHDPMVQEHKEALLLQYPTPSDSLSPGPCSPEFSSSRILILVDGLSDLQQKEH
DLMQVEATRGARRHHVRQLALAKLLEPLTRVSLPPRVSLTVGVAGIGKSTLVRHFVRLWS
RGEICTDVSFVLPFAFWELNTGEKLSAERLVKLAFPHMTDPSLVLSGTCRTLLIFDGLDE
FRCPLDFSETVPCTDPKKEVSVDDLVTNIIRGNLLPEAAVWVTSRPAVASLIPGGLVDRL
TEIPGFSPKEIRLFLSHNFPKGDTASQIWTHLESNKIFMVMSYMPCICWIVAVTFGYLLE
SGWQEGLPRTCTELYSHFCAMRAEAGEPRGREPIKMDQLNGNNRKLLGSLGRLAFYGLLK
HKYTFSEQDMRAYGVDLPSTQGGLGTGVLIREESPSCVAYRFTHLTVQEFLAATYYHICS
KRAIFDLFSESAMSWPKIGFQNHFRSALQRSQQAEDGHLDVFVRFLAGLLCPAAVRPLAG
LLAQGKDDGGQRVWAAGLLQDLLGSGGAVVSLRSVNVAYCLQELQHTEVLRSVEEDLRCG
GLGWKLTRTHCTALAYLLQVSPECSEETNLSACLDYSTVKSLLPQLLYCSHLRLENNNFK
DDVMELLGSLLSAKDCHLQKISLAENAISNKGAKALSRALLVNRTLITLDLRSNNIGSKG
AKFLAEALKMNQVLVSINFQNNLIEEEGARALAEVLLSNRKLVSLNVQKNCIGADGAKRI
AEALKTNRTLTELILSSNQLGDKGTAALAQALTVNHSLHSLHLQSNSISNKGMTALTKAL
RLNRGLICLNLRENSIGVEGAKDMARALQENSSLRHLDLTANLLHDEGVKAIAGAVKVNR
ALTTLRLQWNFIKCTATKSLAHALLTNSTMQLLDLQENAIGDEGVVALAGALKTNTSLCT
LCLQGVSAGRSGAISMAEALMVNKTLHTLDLRGNFIGMEGAKALANALKTNRTLKSLNLQ
ENSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRTNSPDCVVEI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaacacccattacaattctattctggacagaaacaagcgtatcgcatggcaa
gaggactgctatgttgacctccagtctaccctcacctcaacttccaccaagggagagatg
gaagatgtgggctggatccagaaacatcaggggcatctgcagcgcttcattaccactccc
ctcctggagggggcgctgtcccacatgaggaagctggaactgctgagccagggtgaggag
gcccaggtacaagctggagggcagctgcaggagcgggtgggcacccttacctccatcctg
gccagcatggacccccagggctccaacgctctccaggcctaccttgagaactctgactcc
cagatgtacaggctcatcacgatgcacgaccccatggttcaggagcacaaggaggctctt
ctgttgcagtatcccacaccaagtgacagcctctcccctggcccctgtagcccagaattc
tcctcctccagaatcttgatcctggtcgacggcctatcagacctccagcagaaggagcat
gacctcatgcaggttgaggccacccgtggggcgcggagacaccacgtcagacagttggcc
ctggccaaactcctggagcccctcacacgggtcagcctgccccccagggtctcactcact
gtgggagtggccggcatcggcaagagcacccttgtgagacattttgtacgcctttggagc
agaggtgagatctgcacagacgtgagttttgtcttgccctttgccttctgggagctgaac
actggggagaagctgtcggccgaaagactggtgaagctggccttccctcacatgacggac
cccagcctggtgctgagtggtacatgtcggacattgctgatcttcgacggtctggacgag
ttccgttgtcctctggacttctcggagactgtgccttgcacagaccccaagaaggaggtg
tcggtggacgacttggtcaccaacatcatccggggcaacctgctacctgaagcagcggtg
tgggtgacctccaggccagcggtggcctcgttgattcctgggggactagtggacaggttg
accgagatccccggattcagcccgaaggaaattcggctgttcctgagccacaacttccct
aagggagatactgccagtcagatatggactcacttggagtccaacaagatcttcatggtg
atgtcttacatgccttgcatttgctggatagtggctgttacctttgggtacctgttggag
agtggctggcaggagggccttcccaggacctgcactgagctctactcccacttctgtgct
atgagagccgaagcaggtgagcccagaggcagagagcctatcaagatggaccagcttaac
gggaacaaccgcaagctgctgggaagtctgggccgactggccttctacggacttctgaag
cacaaatacaccttcagtgagcaggacatgagggcctatggagtagaccttccatccacc
cagggtggcctcggaactggagtactgatccgcgaggaatcaccaagttgtgtggcctac
cgcttcacccacctgactgtgcaggagttcttagcagccacgtactaccacatctgctcc
aaacgtgccatctttgacctgttcagcgagagcgccatgtcctggcccaagatcggcttc
cagaaccacttcaggagcgccctgcagcgatcccagcaggcagaggatggtcacctggat
gtgtttgtgcggttcctggcggggttgctgtgtccagcggcagtgcggccgctggcaggc
ctgctggcccaggggaaggacgatgggggccaaagggtttgggcagctgggctgctgcag
gacctcctgggcagcggtggtgctgtggtgtcactacgctcagtgaatgtggcctactgc
ctgcaggagctgcagcacacagaggtgctacgcagcgtagaggaggacctgcgctgtggc
ggcctgggatggaagctgacacggacacactgcacagcgctggcctacctgctacaggtg
tctccagagtgcagcgaggagaccaacctgtcggcatgtctggactactccactgtcaaa
agcctgctgcctcagctgctctactgcagccatctcagattggaaaataacaattttaaa
gatgatgtcatggaactgctgggaagcttactgagtgcaaaggactgccaccttcagaag
ataagtctggcagagaacgctatcagcaacaaaggggccaaggccctgagtcgagcacta
ctggttaaccggacgctaattacacttgatctccgtagcaacaacattggatctaaaggt
gccaagtttctagcagaagccctcaaaatgaatcaggtcctggtgtccatcaatttccaa
aataatctcattgaggaggagggcgctcgggccctggctgaggtgctgctgtccaaccgc
aaacttgtctcgctgaatgtacagaagaattgtattggagcagatggggccaagaggatt
gcagaagcgctaaagacaaaccggacacttacagaactgattctgagcagtaaccagctg
ggggacaaaggcactgcagccctggcccaggccctgaccgtcaaccacagcctccactcg
ctgcacctgcagagtaactccatcagtaacaaagggatgactgcgttaaccaaggctctg
cggttgaaccgtggactcatctgtctgaacctgcgcgagaactcaatcggggtggagggg
gcgaaggatatggccagggcactgcaggagaacagctctctccggcacctggatcttaca
gccaacctgctgcacgatgagggggtgaaagccatagctggagctgtgaaggtcaaccga
gcgcttactactttacgtctccagtggaatttcatcaagtgcacagccactaaatccttg
gcccacgccctactcaccaactccaccatgcagctactagatctacaggaaaatgccatt
ggggatgaaggagtggtagctctggcaggagccctgaagaccaatacgtctctctgtaca
ttgtgtctccagggtgtatcagcaggcaggagtggagccatctcaatggccgaggctcta
atggtcaacaaaaccctgcacactctggacctacgagggaacttcataggaatggaggga
gccaaggctttggctaatgcactgaagacaaacagaacactcaaatcattaaatctgcag
gagaactctctgggaatggatggagccatattcatcgccacagccctgaaaggaaaccac
cagctaacttatataaacttgcaggggaacggcatcggagagtcgggagcaaaggtaatc
tctgatgccatcagaaccaactctccagactgtgtggtggagatctga
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