KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368224
Entry
139368224         CDS       T10872                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137  Mitophagy - animal
ocla04144  Endocytosis
ocla04145  Phagosome
ocla04148  Efferocytosis
ocla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139368224
   04145 Phagosome
    139368224
   04137 Mitophagy - animal
    139368224
   04148 Efferocytosis
    139368224
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139368224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139368224
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139368224
   04031 GTP-binding proteins [BR:ocla04031]
    139368224
Membrane trafficking [BR:ocla04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    139368224
 Endosome - Lysosome transport
    139368224
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139368224
  Exosomal proteins of other body fluids (saliva and urine)
   139368224
  Exosomal proteins of colorectal cancer cells
   139368224
  Exosomal proteins of bladder cancer cells
   139368224
GTP-binding proteins [BR:ocla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    139368224
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 139368224
NCBI-ProteinID: XP_070962983
LinkDB
Position
16:23320772..23332249
AA seq 220 aa
MAGRGGPARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQ
RQASPNIVIALAGNKADVANKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEAQGAAGAGGRARAGVDLQEPAPQGRSGQCCGGST
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcgggtcgtggaggaccggcgcgacccaacggcccggcggcaggcaacaagatctgc
cagttcaagctggtgctgctgggggaatcggcggtgggcaagtccagcctggtgctgcgc
ttcgtcaagggccagtttcaggagtaccaagagagcaccattggagctgccttcctcaca
cagactgtctgcctggacgacacgacagtcaagtttgagatttgggacacggcaggccag
gagcgataccacagcctggcgcccatgtactacagaggagcccaggcggcaattgtggtc
tacgacatcaccaacagagacacttttacgcgagcaaagaactgggtgaaggagctgcag
agacaagccagccccaacatagtcatcgctctggctgggaacaaggccgacgtcgctaac
aagagagccgttgatctccaggaagcacaggcctatgccgatgacaacagtctactgttc
atggagacttcagctaagactgctatgaatgtcaacgaaatcttcatggccatagcaaag
aagctgcccaagaacgaggctcagggcgcagccggggcagggggccgggcccgggcagga
gtggaccttcaggagcccgccccccagggccgcagcggccaatgctgtggcgggagcact
tag

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