KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368239
Entry
139368239         CDS       T10872                                 
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00061  Fatty acid biosynthesis
ocla00071  Fatty acid degradation
ocla01100  Metabolic pathways
ocla01212  Fatty acid metabolism
ocla03320  PPAR signaling pathway
ocla04146  Peroxisome
ocla04216  Ferroptosis
ocla04920  Adipocytokine signaling pathway
Module
ocla_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    139368239
   00071 Fatty acid degradation
    139368239
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    139368239
  09143 Cell growth and death
   04216 Ferroptosis
    139368239
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    139368239
   03320 PPAR signaling pathway
    139368239
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ocla01004]
    139368239
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139368239
Enzymes [BR:ocla01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     139368239
Lipid biosynthesis proteins [BR:ocla01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   139368239
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   139368239
  Exosomal proteins of breast cancer cells
   139368239
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 139368239
NCBI-ProteinID: XP_070963033
LinkDB
Position
16:complement(24202708..24237868)
AA seq 682 aa
MDFLLNFLFSPLPTSAIVSLFALMGAALVYLNTRPKPLTMPADLNCQTVGVKDGARKSAL
QEDDNLMSYFHDDARTLYEVFQRGLQVSGNGPCLGYRKPGQPYQWLKYKQVSNRAEHLGS
GLIHRGLKPTPDTFIGIFAQNRPEWIISELACYTYSMVAVPLYDTLGHEALEFIIKKADI
STVLCDKQNKAETLLENCEKGETPELKTIILMDAFDTELTARGAKCGVDILSLKEVEALG
KDHLHKPVPPKPEDLSIICFTSGTTGDPKGAMLTHENVVSDAAGVIKTFEISVVPTTQDV
SISFLPLAHMFERVVQTVLYGAGARVGFFQGDIKLLPDDMKNLQPTVFPVVPRLLNRVYD
KVQSGAQTPFKKWLLNFAIDRKLAEVKEGVIRKDSIWDKLIFHKVQESLGGRVRVMVTGA
APISPSVLNFLRASLGCQIFEAYGQTECTAACSFTMPGDATSGHVGAPIPCNIVKLVDVE
EMNYFASNGEGEVCIKGKNVFIGYLKDPEKTAEALDKDGWLHTGDIGKWLPSGVLKIVDR
KKNIFKLAQGEYIAPERIENVYIRSAPVAQVFVHGDSLQASLVAIVVPDPEVLPGFAQKL
GVQGSHEELCKSQKIKKAIIADLVKLGRQAGLKSFEQVKDLYMHPELFTIENGLLTPTLK
AKRADLKKLFQPQIDSLYASME
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggacttcctcctcaacttcctgtttagccctctgcccacctcggccatcgtctccctg
tttgccttgatgggggctgccctggtctacctcaacaccaggcctaaacccctcactatg
cctgcagacctcaactgccagaccgtaggagtcaaggatggagcgaggaaaagtgccctg
caggaagatgacaacctgatgtcgtattttcatgacgacgccagaacactgtacgaagtt
ttccagaggggactacaagtctcaggtaatggaccctgtctaggctacaggaaaccaggg
caaccgtaccagtggctgaaatacaaacaggtgtccaatcgggctgagcaccttgggtca
gggctgatccacaggggcctgaagccgacccctgataccttcattggtatctttgctcag
aacagaccagagtggattatcagtgagctggcctgctacacctattccatggtggcggtg
cccctgtacgacaccctgggacatgaggcactggagttcattattaagaaagcggacatc
tccacagtgctgtgtgacaaacagaacaaagccgagacactgctggaaaactgtgagaag
ggagagacgcctgagctcaaaaccattatcctcatggatgcctttgacaccgagctgacc
gcacggggcgcaaagtgtggggtggacattctgtccctgaaggaagtggaggctctgggg
aaggaccatctacacaagccagttccaccaaagccagaggacctcagcatcatatgtttt
accagtggaactacaggtgaccctaagggagccatgctgactcatgaaaatgtggtctca
gatgcagcaggtgtaattaaaacctttgagatttccgtggttcccactactcaggatgtg
tccatctccttcctgcctctggcacacatgtttgagagggttgtacagacagtgctgtac
ggtgctggggccagggttggattctttcagggagacattaaactactgccagacgacatg
aagaacctgcagcccaccgtcttccctgtggtgccgcgacttctgaaccgcgtatatgac
aaagtccaaagtggagcccagacccccttcaaaaaatggctcctgaattttgccattgac
agaaagcttgccgaagttaaggagggtgtcatcagaaaagacagtatatgggacaagctc
atcttccacaaagttcaggagtcgttggggggacgtgtgcgagtgatggtgacgggagca
gcgcccatctctccctccgttctcaacttcctgcgggcatctctggggtgtcagattttt
gaggcatacggccaaacagagtgtactgccgcctgctctttcactatgccgggagacgcc
acttctgggcatgttggagctcctataccttgtaacattgtgaaactggttgatgttgaa
gagatgaactactttgcttccaatggtgaaggggaggtctgtatcaaaggtaaaaacgtg
ttcatcggatatctgaaagaccctgagaagacagcagaggccctggacaaagatggctgg
ctacacaccggagacattggcaaatggctaccgagtggagtcttgaagatcgttgaccgc
aagaagaatatcttcaagctggctcagggagagtacatcgccccagagaggatagagaac
gtgtacatccgcagtgcacctgtagcccaggtgtttgtccatggagacagtcttcaggcc
agcttggtagccattgtggtccctgacccagaggtcctgccaggtttcgcccagaaacta
ggagtccagggttctcatgaggagctgtgcaaaagccaaaaaatcaaaaaggccattatc
gctgacctggtcaagctgggccggcaagcagggctgaagtcattcgaacaggtgaaagac
ctgtacatgcacccagagttgttcaccatagagaacggccttctcactcctacgctgaag
gccaagagggccgacctcaagaagctcttccagccgcagatcgacagtctctatgctagc
atggagtga

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