Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368256
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Entry
139368256 CDS
T10872
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
139368256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139368256
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139368256
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Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
139368256
NCBI-ProteinID:
XP_070963069
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All DBs
Position
16:complement(25773040..25808438)
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKAEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWENSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTDKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHAAEVMETAGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtcccgagtccccctccccctgcggaaatgtccagcgggcctgtggcggag
agctggtgctacactcagatcaaagtggtaaaattctcctacatgtggaccatcaacaac
ttcagcttctgtcgcgaggagatgggcgaggtcattaagagctccaccttctcctcagga
gccaatgacaagctcaaatggtgtctgcgggtgaaccctaaagggctagatgaagagagc
aaagactacctgtccctctacttgctcctggttagctgtcccaaggctgaggtgcgtgcc
aagttcaagttctccatcctcaacgccaagggagaggagaccaaagccatggaaagccag
agagcatatcggtttgtccaggggaaggactggggctttaagaagttcatccgccgagac
ttcctgttggacgaggccaacggtcttctgcctgacgacaagctcaccttgttttgtgag
gtgagtgtggtgcaggactctgtgaacatctcgggtcagaacaccatgaacatggtgaag
gttcctgactgcagactggctgatgagctgggcgggctgtgggagaactcgcgcttcacc
gactgctccctgtgtgtggccgggcaggagttccaggcccacaaagccatattagcagca
cgctctcctgtcttcagtgccatgtttgagcatgagatggaggagagcaaaaagaaccga
gtggagatcaatgacgtggagccagaggtcttcaaggagatgatgtgtttcatctacaca
gacaaggcccccaacttggacaagatggctgacgaccttctagcagccgctgacaagtat
gctcttgagaggctgaaggtgatgtgtgaggatgcgctgtgcaccagtctgtctgtggag
aacgctgcagagatcctcatcctggcagacctacacagcgccgaccagctcaaaacacag
gctgtggacttcatcaactaccatgctgccgaagttatggagacggcgggctggaagtcc
atggtggcatcccatcctcacctggtagccgaagcctaccgctcgctggcctcggcccag
tgccccttcctgggaccgccccggaaacgcctcaaacagtcttaa
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