KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368272
Entry
139368272         CDS       T10872                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139368272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139368272
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139368272
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     139368272
   Cul5 complex
     139368272
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     139368272
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 139368272
NCBI-ProteinID: XP_070963099
LinkDB
Position
16:26325549..26347981
AA seq 119 aa
MDVFLIIRRQKTTIFTDAKESTTVYELKRIVEGILKREPEEQRLFKDDQLLEDSKTLGDC
GFTNQTARPQAPCTVGLAFRMGDEMFEQLQVGAFSSPPELPDVMKPQDSGSTANEQTVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgtgttccttataatccggcgtcagaagaccaccattttcacagatgccaaagag
tccaccaccgtctacgagctgaagcgcattgtagagggaattctcaagagagagcctgag
gaacagaggctcttcaaggatgaccagttgctagaagacagtaaaactcttggcgattgc
ggcttcaccaaccagactgcaagacctcaggccccatgcactgttggactggctttccga
atgggtgatgagatgtttgagcagctgcaggtgggggcattctccagccctccagagctc
cctgacgtcatgaaaccccaagactctggcagcactgccaacgaacagactgtgcagtga

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