Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368285
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Entry
139368285 CDS
T10872
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ocla03012
]
139368285
Translation factors [BR:
ocla03012
]
Eukaryotic type
Initiation factors
eIF-3
139368285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
Motif
Other DBs
NCBI-GeneID:
139368285
NCBI-ProteinID:
XP_070963121
LinkDB
All DBs
Position
16:complement(27109876..27169128)
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AA seq
955 aa
AA seq
DB search
MSRFFATGSDSESEDSSSSDEITPKVPGTTFTKQSLLLRDDEEDTKRVVRSAKDKRFEEL
TNLIKTIRNAMKIRDMSKCLEEFEQLCRAFLKSKTIVDKEGMPPFYIRLLSDLEDYLNQL
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDYETEIASYKENPMVSADEEDEKDEVESGV
SSDSDDEPGDAKSFLKKKPATEALPPDSSKFLKGAADEESSSSSDVDDEDWDSDTAESGS
GSEDEEGNNAIAKIFLKKSRFFSSPSIFSCEKKKEDRKKRHKRKGRVEEEAEEEAQEEDE
GEWEKVKGGVPLVKADMWKKCLDCIDELLDILFNNNNIFIGENIAEDSENLAIIDSQPFR
VRGCILTLVERMDEEFTKIMQNTDPHSQEYVDNLKDEGRVCGIIDRLLGYLETKGSSEEV
CRVYLRRIMHTYYKFDYKAHRRTLGLQGETKSEQDAEESEGEDSSFIMDRLCKFIYAKDR
TDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICA
FRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQERNAEQEKIEKRRQVPFHMHINLE
LLECVYLVSAMLLEIPYMAAHEFDARRRMISKQFHHQLRVGERQPLLGPPESMREHVVAA
SKSMKMGDWRTCHSFIINEKMNSKVCDLFPETQCVREMLVRKIQEESLRTYLFTYSSVYD
SISMETLKEMFELELPMVHSIISKMIINEELMASLDQPTQTVVMHRTEPTSLQNMALQLA
EKLGGLVENNERVFDLKQGVYGGYFNRDQKGYQQKQGGYNRGQRGSYQQKQGGYNRDGQR
GGYQQKQGGYNRDGGGYQQRQGGYNRDGGGYQQRQGSYNRDGNRGGGGYQGQNRGGYQGG
GGGYQGGGGGYQGGGGGYQGGGGGYQGGGGGYQGGGGSGGYRGGYKGGYQDRRDY
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtttctttgccaccgggtccgacagcgagtctgaggattcctcgtcgtctgat
gagatcacccctaaagtacccggcactactttcaccaagcagtcattgctgcttcgtgac
gatgaggaagacaccaagagagtcgtgcgtagtgccaaggacaagaggttcgaggagcta
actaacctgatcaagacgatccgcaacgccatgaagatccgagatatgtccaagtgtctg
gaggagtttgagcagctatgtcgagcattcctcaaaagcaagactatagtggacaaggaa
gggatgcctcccttctacatccgtcttctgtccgacctagaagactatttaaatcagctt
tgggaggacaaagaagggaagaagaagatgaacaagaacaacgccaaagcactcagcacc
ctgcggcagaagatccgcaagtacaacagggactacgagacggagatcgccagctacaag
gagaacccaatggtctctgcggatgaggaggatgagaaggatgaggttgaatcgggggta
tcgtcagatagtgatgacgagccgggagacgccaagagcttcctgaagaagaaaccggcc
accgaggcacttccgccggacagcagcaagttcctgaagggagcagcggatgaggagtct
tccagcagcagtgacgtggatgacgaagactgggactcagacacagcggaaagcggcagt
ggtagtgaagacgaagagggcaataacgccattgccaaaatcttcctcaagaagtcacga
tttttttcgagcccctcaattttttcttgtgagaagaaaaaggaggataggaagaagaga
cacaagcggaaggggcgcgtggaggaagaggcagaggaagaggcccaagaggaggacgaa
ggagaatgggagaaggtgaagggaggagtgcccctcgttaaggctgatatgtggaagaag
tgtctggactgcattgacgagctgctggacatcctctttaacaacaacaacatctttatc
ggcgagaacatcgccgaggacagcgagaacctggccattattgactcacagccattcagg
gtgcgcggctgcattctgaccttggtggagaggatggacgaggagttcaccaagatcatg
cagaacactgacccccactctcaagagtacgtggacaacttgaaggacgaggggcgtgtg
tgcggcatcatcgaccgcctgctgggctacctggagaccaagggcagctcggaggaggtg
tgccgcgtctacctacgccgcatcatgcacacctactacaagtttgactacaaggctcat
cgccgcaccctgggcctccagggagagaccaagtctgagcaggatgcggaggagagcgaa
ggcgaggacagttccttcatcatggaccgcctgtgcaagttcatctacgctaaggaccgc
acagaccgcatccgcacatgtgccatcctgtgccacatctaccaccacgcacttcactcg
cgctggtatcaagcccgtgatctgatgctcatgagccacctgcaggataatattcagcac
gctgacccgcctgtacagatcctgtacaacagaaccatggtgcagctggggatctgtgcc
ttccgccagggcatgatcaaggatgcccacaatgccctgctggacatccaatcgagtggc
cgcgccaaggagctgctgggtcagggcctgctcatgaggaacatgcaggagaggaacgcc
gagcaggagaaaatcgagaagaggcgacaggtgcccttccacatgcacatcaacctggag
ctgctggagtgcgtgtacctggtgtctgccatgctgctggagatcccctacatggcggcc
cacgagtttgacgcccgccgcaggatgatcagcaagcagttccaccaccagctgagggtg
ggcgagaggcagccccttctgggacccccagagagcatgcgtgagcacgtggtcgcggcc
agcaagtccatgaagatgggcgactggcgcacctgccactcattcatcatcaacgagaag
atgaacagcaaggtttgcgatctattccctgagacgcagtgcgtgcgagagatgcttgtc
aggaagatccaggaggagtctctgaggacttacctgttcacctacagcagcgtttacgac
tccatcagtatggagacactgaaggagatgtttgagctggagctgcccatggtgcacagc
atcatcagcaagatgatcatcaacgaagagctcatggcatccctggaccagcccacccag
acggtggtgatgcaccgcacagagcccacctccctgcagaacatggccctgcagctggca
gagaagttgggtggcctggtggagaataacgagcgcgtctttgacctcaagcagggcgtc
tacggtggctacttcaacagagatcaaaaaggctaccagcagaagcagggtggctacaac
agaggccagagaggcagttaccaacagaagcaaggcggttacaaccgagacggtcagaga
ggcggctaccaacagaagcaaggaggttacaacagagacggaggcggttaccaacagagg
caaggcggttacaaccgagacggaggcggttaccaacagaggcaaggcagttacaaccga
gatggaaaccgaggcggtggtggctaccaggggcagaacagggggggctatcagggtggt
ggtggtggctatcagggtggtggtggtggctaccagggtggtggtggcggctaccagggt
ggtggtggcggctaccagggtggtggtggcggctaccagggtggtggtggcagtggtggc
tacaggggaggctacaaggggggctaccaggacaggagagactactga
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