Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368288
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Entry
139368288 CDS
T10872
Name
(RefSeq) integrin alpha-M isoform X1
KO
K06461
integrin alpha M
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04514
Cell adhesion molecules
ocla04810
Regulation of actin cytoskeleton
Brite
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139368288
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139368288
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin alpha subunits
139368288
CD molecules [BR:
ocla04090
]
Proteins
139368288
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
139368288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139368288
NCBI-ProteinID:
XP_070963133
LinkDB
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Position
16:complement(27281365..27338830)
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AA seq
1142 aa
AA seq
DB search
MTMDWIIPLSFYLSVPQGALAFNIDPAAWKYVSEPAAGFGYKVVQNNPSSLLISAPLDQY
KQNRRGQVYRCLVRDSSCIPLSIQEPSHGINMSLGLSMTKDPESLNTMVCGPTIPRECKS
ITTYNGMCFEIDQSLNVKQPVPSSLEECPGQTDIAFLLDGSGSVNKFDFEKMKDFVKDLI
REFLERDTKFAVAQYSDYCTIHFDLNTFNVMNRDYQVNSIAQQGGRTYTAASIKKVVQEV
FSTSRGSRPKAKRIMIVITDGQSHDSGMLENAASEAEAKNIIRFAIGVGGAFSSSTARKE
LETIASSPPRNHMFQVGSFQALDQIKDTLQNSIFPIEGSQTTGESIKMEMAQEGFSAAYI
PKRGFQMGAVGAFQWKGAYQEYTGSTLYPTPQQSQNMEPDSYMGYSMAVATTHTRQFTIL
GAPRFKHTGRVVVLPSRDTDKPIEYSGQIGAYFGAEVCAMDVNKDSYSDLVLISAPMFTD
RDREGRVYVCTINDRSGVACQLNAEMTLVGDAGQMGRFGTSLAPLPDLNMDGFNDLAVGA
PLENDGQGSVYIFHGTSSGISKIKSQKISASDVQSGLKYFGLSISQTSLDMSLDSLPDLA
VGSKGAVLLLRSRPIVTLMARVSFNPPKIPTNQVDCSTPLRNIAKVCFTMTRQTTDTKDL
QAKINYTLTLDVTRQAPNYRAYISPKIREETNTITLRLQEQCFSHNFFIEACPEDSLNEL
SNELHFTFEGLPTTSPGGLSSSLSPRSPTSTYHPLGFEINCGADNNCIDNLKVDFNFTRS
SEVRVGIDEVINVTVSVESREENSYNSHVILKYPAGLSFRKFTILQGRVECNSSDSVGNV
MWGLSDCTIDKPIFKSDSKALLVISYGIDRNTQFGQMMTFIANASSGNTHSPKSELSKVK
EIGVKYSIFVVIKRNEDSTSYVNFTAGKNDLQKHVKQSFEVENYERGFNLTVIIKVPMKL
GDKDIWADPNGIQIQGCQRHKNEEPTATEFVDQLQKNHAVDCSVANCGVFMCKSFIRNLD
RNSYNITGNLSSQWIEQIGLESAQFNLVSSATVDYDRNQYIYYSSDSKNNPPIQKIETQV
EVYPEVNFTKGVIGGVVGGLLLLALITAGLYKAGFFKSQLKQMMQNTSEDGPGGDGEAAS
PE
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggattggataatacccctttcattctacttatcagtgcctcaaggtgctttg
gcttttaacattgacccagctgcttggaagtatgtcagcgaacctgctgctgggtttgga
tacaaggtggtacagaataacccatcaagcttgcttataagtgcccccctggatcagtat
aagcaaaataggaggggacaagtttaccgatgtctggtcagagattcatcttgcatacca
ttgtcaatacaagagcccagtcatgggatcaatatgtctcttggtttgtcaatgacaaag
gatcccgagtcactaaacaccatggtatgcggaccaaccatcccaagagagtgcaaatcc
atcaccacctacaatgggatgtgctttgaaattgaccaaagtcttaatgtgaaacaacct
gtcccttcatctctggaagaatgtcctggacaaacagacatagcctttctattggatggg
tcaggaagtgttaacaaatttgattttgaaaaaatgaaagactttgtgaaagatctgatc
agggaatttctggaaagggatactaagtttgcagttgcccagtattcagactattgcact
atacattttgacttaaatacgtttaatgtcatgaatcgggattatcaagtgaatagtatt
gctcaacaaggtggacggacttacacggcagcatccatcaaaaaagttgtccaagaggtc
ttttcaacgagtagaggatccagaccaaaggcaaagaggatcatgatagtcattacagat
ggacaatcacatgacagcgggatgctggaaaatgcagcctctgaggctgaagccaaaaac
attattcgatttgccattggggtgggcggagccttttcttcgtcaacagcaagaaaggag
ttagaaacaattgcctcctctccaccacgcaaccacatgtttcaagtgggcagcttccaa
gcacttgaccaaatcaaggatacattacagaacagcatttttcctattgaaggatctcag
actactggggaatctattaagatggaaatggcccaggagggattcagtgcagcatacatt
cctaagagaggattccagatgggagctgttggagccttccaatggaagggggcttaccag
gaatacacagggagcactttataccctacaccacaacagagtcagaacatggaaccagat
agctatatggggtactccatggcagttgctacgacacacactcgccagtttaccatttta
ggtgctccaagatttaaacacactggacgagtggtggttcttccgtccagagacacagac
aagccgatagaatattctggacagattggcgcttattttggtgcagaggtctgtgcaatg
gatgtgaataaagactcatatagcgacctagtcctcatatcagctccgatgttcacagac
agagacagagagggcagggtatatgtctgtaccatcaatgacaggtctggggtggcctgt
caattaaatgctgagatgacactggtgggggatgcaggacaaatgggcaggtttggaact
tctcttgccccactgcctgacctgaatatggatggatttaatgatttagcagtcggagca
cctctagagaacgatggtcaaggaagtgtctacatattccatgggacgagtagtggaatc
agcaaaatcaaatctcagaaaatttcagcctcagatgtacagtctggattaaagtatttt
ggactgtccatcagtcagacttccctggacatgagtttggattctctcccagacttggcc
gtgggatcaaagggggctgttctcttactcaggtccaggcctatagtaacattgatggca
cgagtttccttcaacccacccaaaatccccaccaaccaggtggactgcagtacacctctg
agaaacattgctaaagtctgtttcaccatgaccagacaaacaacagacacaaaagatctt
caagcaaagattaactatactttaactctggatgtgacccgccaagctccaaactatcgt
gcttatatcagtccaaagatacgggaggaaacgaatactattacattaagacttcaagag
caatgcttctctcataacttctttattgaggcttgcccagaagactccctcaatgaactg
tccaatgaacttcacttcacatttgaagggttgccaacaacatctcctggtggcctcagc
tctagcctttccccgcggtctccgacttcaacatatcatcctttaggttttgagatcaac
tgtggcgctgataacaactgcattgacaacctgaaagtggattttaatttcactaggagt
tcagaggtgagggttggcatagatgaggtgataaatgtgacagtgtcagtcgaaagcagg
gaagagaactcttacaacagccacgttattctcaaataccctgcaggactttcattcagg
aagttcaccatactccagggaagagtggagtgtaactcatcagacagtgtgggaaatgta
atgtggggactaagtgactgcaccattgacaagccaatcttcaaaagcgattctaaggct
ctcttagtaatttcctatgggattgatagaaacactcaatttggccaaatgatgacattc
attgcaaatgcctcaagtggaaatacacactcgccaaagagtgaactttccaaagtgaaa
gagattggtgtgaaatacagcatttttgttgtgattaaaagaaatgaggattcaaccagt
tatgttaatttcactgccgggaaaaatgatttgcagaaacatgtgaaacaatcctttgag
gttgaaaattatgaaagaggcttcaatcttactgtgataatcaaggtgccaatgaagctt
ggtgacaaagacatctgggctgatccaaatggtatacagattcaaggttgtcaaagacac
aagaatgaggaacctactgccacagagtttgtggaccagctgcagaaaaatcatgctgtg
gactgctctgtcgcaaattgtggggtgttcatgtgcaaaagcttcattcgaaatttggat
cgtaactcttataacatcactggtaacctcagctctcaatggatagaacagattggtctt
gagtctgcccagttcaacttggtcagcagtgccactgtagattatgacagaaaccaatac
atctattattcttcggactccaaaaataacccacctatacaaaagattgaaactcaggtg
gaggtgtatcctgaggttaacttcacaaagggggtcattgggggtgttgtgggaggtctg
ctgctgttagctttgatcacagctgggctttataaggctgggtttttcaaaagccagttg
aagcagatgatgcagaatacatcagaagatggaccagggggtgatggagaagctgcctcg
cctgaataa
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integrated database retrieval system
