Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368297
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Entry
139368297 CDS
T10872
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139368297
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139368297
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
fn3
ig
Ig_2
Ig_VEGFR-1-like_5th
LRR_5
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
139368297
NCBI-ProteinID:
XP_070963145
LinkDB
All DBs
Position
16:28531094..28557064
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AA seq
664 aa
AA seq
DB search
MQAGCSVQAYKWAKMFLAFVLGLYLATGALPPSVSACPSQCSCFFHNLSDGSMARSVICN
DPEISIVPASFPVDTSKLRIEKTAIHRIPSEAFSYLPNLEFLWMSFNVLSSLKPDSFRGM
LNLEELRLDGNALTAFPWESLMDMSSLTLLDLHNNQLTSVPADATIYLKNLTYLDLSSNN
LLTVPAEVLATWLTVKPVQGPENSKMILGLHDNPWLCDCRLYDLVQFQKLPTFSVALIDT
RLRCAAPESLSGVLFSDAELRRCQAPRVHTAVAHVRSAVGNNVLLRCGTIGVPSPDLAWR
RAEGKALNGTVQQENSKEGIIWSILSVPAVSYRDSGKYVCKATNYAGNAETIISLVVSDA
PPEPDNNNNQTSVVAATVKKNKVNKPNGMGKAAYQEKLVDRLVVPTPNPQPPSAVVDSSP
EPEGVVVGSVADRATPGPAKLPSPDGLLELEKTNLSNLAQAQYDPDRIVRSVKVLGDTEN
TITLNWRAPKAKNTTAFSVLYAVFGERDMRKINVAAGQNRVFIEGLVPKTKYIACVCVRG
LIPKKEQCVIFSTDEAASAAGTQKLINVIVITVACVIAVPLTVIVCCGALKRRIQKIWGK
KSKDIQDSYVTFETLSPGTKAKGLEGEYLTRLNPEESNRLLSARSSLDSEATAKIEGQPN
EYFC
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctggctgttcagtgcaagcatacaagtgggccaaaatgttcctcgcattcgtc
ttgggactctacctggcgacaggtgcgctacccccctcggtgagcgcgtgcccgtcacag
tgtagctgtttttttcacaacctaagtgatggatctatggccaggagtgtaatttgcaat
gaccccgagatctccattgtgcctgccagtttccccgtggacacgtccaagttgcgaatc
gagaaaacagccatccatcgtatcccgagcgaagccttcagttacctccccaatctggag
ttcctctggatgtccttcaatgtgctgtcctctctcaagccggacagtttccgtgggatg
ctaaatctggaggagctgcgactggatgggaatgccctcaccgcgttcccctgggagtct
cttatggatatgtccagcctcacgctgctcgacttgcacaacaaccagttgacctcagtt
cccgcagacgccacaatttatttaaaaaacctgacctacctggatctgtccagcaacaac
cttctgactgttccggctgaggtgctcgccacctggctaacagttaaacctgtgcagggc
ccagagaactccaaaatgatacttggtctccatgacaatccctggctgtgtgactgccgc
ctgtatgacctggtccagttccagaagttgccaacgttctctgtggcattaatcgacaca
cgcctccgctgtgcagctcccgagagcctgtcaggtgttctgttcagcgatgccgagctg
cggaggtgccaggcgccacgcgtccacacagcggtggcacacgtccgcagcgccgtggga
aacaacgtgctgctgcgctgcgggaccattggcgttcccagcccggatctggcctggcgc
agggcggaagggaaagccctgaacgggacagtccagcaggagaactccaaggaaggcatt
atctggtccatcctcagtgtcccagccgtgtcctaccgtgactcagggaagtatgtctgc
aaggccactaactacgccggaaatgcagagaccatcatctccctggttgtctctgacgct
cccccagaacccgacaataacaacaaccaaaccagcgtggttgctgctactgtaaaaaaa
aacaaagtcaacaaacccaacgggatggggaaggcagcataccaggagaaactggtggat
aggttagtggttcccacccccaaccctcaacccccatctgctgttgtggactccagccct
gagcctgaaggtgtggtagtgggaagtgtggcagatagagccacccctggaccagccaag
ttgcccagtccagacggactcctggagctggagaagaccaacctgagcaacctggcccag
gcccagtatgacccggaccggatagttcgctcggtcaaggtgttgggcgatacggagaac
accatcaccctgaactggcgggcgcccaaggccaagaacaccacagccttcagtgtgctc
tatgccgtcttcggcgaaagagacatgcgcaagatcaacgtggcagcgggtcagaatcgg
gtcttcatcgagggcctggtgcccaagactaagtacattgcctgcgtgtgtgtccggggc
ctgatccccaagaaggagcagtgtgtcatcttctccaccgacgaggcggccagtgccgct
gggacccagaagctcatcaacgtcatcgtgattaccgtggcttgtgtcattgctgtgcca
ctcaccgtaatcgtctgctgtggtgcgctcaagaggcgcatccagaagatttggggcaag
aagtccaaggacatccaggactcatatgtgacttttgagacgctgtcccccggaaccaag
gctaaagggttggagggtgagtacctgaccagactcaaccctgaggagtccaaccggctg
ctgtcggcccgatccagtttggactctgaggccacggcaaagatagagggtcagcccaac
gagtacttctgctga
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