Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368344
Help
Entry
139368344 CDS
T10872
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein-like
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ_6
PDZ
PH
PH_10
TSKS
DUF4160
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
139368344
NCBI-ProteinID:
XP_070963209
LinkDB
All DBs
Position
16:complement(34168411..34309682)
Genome browser
AA seq
1629 aa
AA seq
DB search
MEEGQQNRVLHSTKESDREQRLRLCVLHEILNTERDYVRVLLFLQSAFLHRIRQTAEEQQ
CLSPEHVKTLFSNIESILDVHKEVLSAVEASLQPEPQPGHGLGHVFLQFKGRFSVYGEYC
SNNEKALRLLMELNKIPEIRTFLLHCMLLGGKKSTDIPLEGHLLSPIQRICKYPLLLKEL
LKRTPKKHSDYPAVEEALQAMKAVCSNINETKRQMEKLEALEQLQSHIEGWEGTNLTDIC
TELLLHGNLLKISAGNIQERVFFLFDNLLVYCKRKSRVTGKKSTKRTKSINGPLYVFRGR
INTEVMEVENVEDGTADYHSNNYTVTNGWKIHNTAKNKWFVCMAKNAEDKQKWLDAILRE
REQRESLKLGMERDAYVMIAKKGEKLYHMMMTKSRHLIKDRRRKLTTVPKCFMGNEFVSW
LMESGEISTPDEGVNLGQALLENGIIHHVSDKHQFKNEPVFYRFRYDDGTYKARSEMEDI
MSKGVRLYCRLHSLYTPVAKDRDYHLKTFKSVLPASKLVDWLLSQGDCSTREEAVTMGVG
LCNNGFMHHVLEKTEFKDESQFFRFYADEEMEGTNSKSKQLQRNDFKLIENILVKSLVIH
PEEEDYGFEIEEKNKAIVVRSVTKGSHAEMAGLQEGRKIFTINEDLVFLRPFQEVETMIS
QAFCIRRSLRLLVNTKAKEIVKIPDTPYALSFKLSGSAPPHVHAVRKGSEAAVAGLQPGQ
CILKVNGNNMNHSDYQEVLEHFTSHHDQQDQPDMCQWVYRAFEDVEEEGGSFKACTEEKC
SDIDEEHGRNGTDYRGGLSQLSLSDDTVPLVSMTVDNVHLEHGVVYEYVSTAGIKCHVLE
KMVEPKGCFSLTAKILEAFARDDSHFVRNCSQLISQSDRVMSMPQFEFRNICETKLESIR
RRISRYQQFAQELRRKACPTFKQAGVLTHPLGCMDFVPTNCHVNLMQVSHPKTTMVSGRA
FSFRFGRKNSFYGLDPNQANLSRMSHTQHCVTSMGAPCYNCSGLGEEGDGEEDITGSGEG
IPDRMQQANRGNGLSFLLKQEDMEIQEAYIRLYNRLNIAVQEMRQYVTQIDVLLLSITEP
TQPQGSESPAYEAIQPPSVTPEEGDQEKAEHGGIKKVCFMVTEEDQEDSGQDTMSYRDSY
SECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPCDMSIPSDKQDKLHGCLEHLFNQVD
SITSLLKGPIMTKACEETKHFHPDHTEPEFRHTEDLMVHCHIIHKNIQEDPWNLPSSIKT
LVESLQRFVDDGKNQVLLALLKCSDTALQLQRDVIFCQSAVSAVCTLAEQLLAALRAHFN
NAGEYEEDCKDTSRKWLEQAAAIGVLLNFQATLTPHVKEERTMLEDTQAALLDLDKVTVF
FRQLEDECLVVNTPVCYHVEGNRQALRVTMYLDSCHFSELPTRLQNGGSLKLHTVLFTSA
LERPEGVSEQDYVSIEEFQQRTNAVALERVKAYYRKLRAFYLEKSNLPTDSNTTAKKIDQ
LLRPLNTLDDLCRLMQSYVNVHPNAAGHPSGVSVLCVSSELCNRLGACHITMCATGMQRC
TLSVTLDQAMILARNHGLMPRCIMQTMDIMRKQGTRVEISAKNLKVMDQMPLAAPRLFKL
CLPPEDGDL
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggggcaacagaaccgcgtccttcacagcaccaaagagtcggaccgcgagcaa
cgcttgaggctctgtgttttacatgaaatcttgaacaccgagagggattacgttcgggta
ttgcttttccttcagtcggcctttttgcacagaatccgacaaactgcagaggagcaacaa
tgtctgtcacctgagcatgtcaagaccctgttttccaacatcgagtccatcctggacgtt
cacaaagaggttctgtctgcagtggaggccagcctgcagccggagccgcagcctgggcac
ggccttggacatgtcttcctccagtttaaggggcggttctctgtgtatggggagtactgc
agtaacaacgagaaggccctgcggctgctgatggagctcaacaagatccccgaaatcagg
accttcctcctgcactgtatgctgttgggagggaagaagagcacagacattcccctggag
gggcacctactatcacccattcagagaatctgcaagtaccccctcttactgaaggagctg
ctgaagcggacgcccaagaagcactcggactaccctgcggtcgaggaggccctgcaggcc
atgaaggcagtgtgctccaacatcaacgagaccaagaggcagatggagaaactggaggcc
ctggagcagctacagtcgcacatcgagggctgggagggcaccaatctgactgacatctgc
accgagctgctgctccacggcaacctgctcaagatctccgccggcaacatccaagagaga
gtcttcttcctgtttgacaacctcctggtctactgcaagaggaagtccagggtaactggg
aagaaatccacaaagaggaccaagtccatcaatggccccctgtacgtgttcagaggaaga
atcaacacagaggtgatggaagtggaaaacgttgaggatggaacagctgactaccacagc
aacaactacacagtgaccaacggctggaagatccacaacacggccaagaacaagtggttc
gtctgcatggccaagaacgcagaggacaagcagaagtggctcgacgccatcttgagggaa
cgagagcagagagagagtctgaagcttgggatggagcgggatgcctacgttatgatcgcc
aagaaaggcgagaagctttaccatatgatgatgaccaagagccgccacctgatcaaggac
cggcgccgaaagctgactaccgtgcccaagtgcttcatgggaaatgagtttgtgtcgtgg
ctgatggagagtggagagatcagcacgccagacgagggggtcaacttgggtcaagctctg
ctggagaacggaatcatccaccatgtgtcagacaagcaccagttcaagaacgagccggtg
ttttaccgtttccggtacgatgacggcacctacaaggccaggagcgagatggaggacatc
atgtcaaagggcgtgaggctttactgtcgtctgcacagcctgtatacccctgtcgccaag
gatagagactaccatttaaaaaccttcaagtctgtgttgcctgccagcaaacttgtggac
tggctcttgtcacagggtgattgttccacacgtgaggaagcggtgacaatgggggtcgga
ctgtgcaacaacggcttcatgcaccatgttctggagaagaccgagttcaaagacgagtcg
cagttctttcgtttctacgccgacgaggagatggagggtaccaactccaagagcaagcag
ctgcagcgcaacgactttaagctcatcgagaacatcctggtcaagtccctagtgatccac
ccggaggaggaagactacggctttgagattgaggagaagaacaaggccatcgtggtgagg
tctgtcaccaagggctctcacgctgagatggcggggctgcaggagggcaggaagatcttc
accatcaacgaggacctggtgtttctcaggcccttccaggaggtggagaccatgatcagc
caggccttctgcatccgccgctccttacgcctgctggtcaacaccaaggccaaggagatt
gtgaagattccagacactccctatgccctgtccttcaaactcagtggctctgccccacct
catgtacatgcagtaaggaaagggtcggaggcggcggtggcaggcctccagccaggtcag
tgcatcctgaaggtgaatggcaacaacatgaaccatagcgactaccaggaggtcctggag
cacttcacctcccaccacgaccagcaggatcagcccgacatgtgtcagtgggtgtaccgt
gcgtttgaggacgtggaggaggaggggggctcgttcaaggcctgcacagaagagaaatgc
tcagacatagatgaggagcacggcaggaacggaacagactacagggggggcctgagccag
ctgtctctgtctgatgacacggtgcccctggtgagcatgacggtggacaacgtgcacctg
gagcacggcgtggtgtacgagtatgtcagtacagctggcatcaagtgccacgtcctggag
aagatggtggagcccaagggctgcttcagccttactgcgaagatcctggaggcctttgca
agagacgacagtcattttgtgcgtaactgcagccagctgatttcgcagagtgaccgcgtg
atgtccatgccccaatttgagttcaggaacatctgtgaaaccaagctggagagcatccgc
cggcgaatcagcagataccagcagtttgcccaggagctgaggagaaaggcgtgccccaca
ttcaagcaggcaggcgtactgacccacccactgggctgcatggactttgtgcccaccaac
tgccacgtcaacctgatgcaggtgtcccaccccaaaaccaccatggtgtctggcagggcc
ttcagcttccgcttcggacgcaagaactccttctacggcctggaccccaaccaagctaac
ctgtctcgcatgtctcacacccaacactgtgtgactagcatgggtgccccgtgttacaac
tgcagcggtctcggggaggagggtgatggtgaggaggacatcacgggctctggagagggc
atcccagacaggatgcagcaggccaaccgggggaatggcctcagcttcctgctcaaacag
gaagacatggagatccaggaagcctacatccgcctctacaaccgcctgaacatcgccgtg
caagagatgaggcagtacgtcacccagatagacgtcctccttttgtccatcacggagccc
acccagccgcagggcagcgagtccccagcctacgaggccattcagcccccttccgtgacc
cccgaagagggggaccaggaaaaggcggagcacgggggcatcaagaaggtctgcttcatg
gtgacggaagaggaccaagaggactcgggccaagacaccatgagctacagggactcctac
agtgaatgtaacagtaacagggattccgtcttgtcatacacaagtgtacgtagcaacagc
tcttacctggggagtgatgagatgggttcaggtgatgagctgccctgtgacatgagcatt
ccctctgacaagcaggacaagctgcacggctgtttggagcaccttttcaaccaggtggac
tccatcaccagcctgctcaaagggcccatcatgaccaaggcctgcgaggagaccaagcac
tttcaccctgaccacactgagccagagttccgtcacactgaagacttgatggtgcactgt
cacatcatccacaagaacatccaggaggacccttggaacctgcccagctcaattaagaca
ctggtggagagcctgcaacgatttgtggatgatgggaagaaccaggtgcttctggctctg
ctcaaatgttcagacacggctctgcagctgcagcgggacgtgatcttctgccagagtgcg
gtgagcgctgtgtgcacactggccgagcagctcctggcggcgctgcgggcgcacttcaac
aacgctggcgagtacgaggaagactgcaaggacacgagccgtaagtggctggagcaggcg
gctgccatcggcgtgctgctcaacttccaggcaacgctgacgccccacgtgaaggaggag
aggacaatgctggaggatacccaggcagccctgttggacctggacaaagtcaccgtgttc
ttccgccagctggaagatgaatgcctggttgtaaacacgccggtgtgttaccacgtggag
ggcaaccggcaggccctgagggtcaccatgtacctggacagctgccacttcagtgagctc
cccacgcgcctgcagaatgggggcagcctcaaactgcacactgtactcttcaccagcgcc
ctggagaggccagagggagtgtccgagcaagactacgtgtccatagaagagttccagcaa
cgcaccaacgccgtcgcactggaaagggtcaaagcctactaccgaaaactcagggctttt
tacctggagaagtcaaatcttcccaccgactccaacaccacagctaagaagatagaccag
ctcctaagacccctcaacactctggacgacctgtgtcgtctgatgcagtcatatgtcaac
gtgcatcccaatgccgcaggccacccctctggcgtcagcgttctgtgtgtgtcctccgag
ctgtgcaaccgcctgggcgcctgccatatcaccatgtgtgctactggcatgcaaaggtgc
accctgagcgtgacccttgatcaggctatgatcctggcgcggaaccacggcctcatgccc
cgctgcatcatgcagaccatggacatcatgcgcaaacagggcaccagggtagagatttct
gctaaaaacctcaaagtgatggaccagatgccgctcgcagccccaaggctcttcaagttg
tgtctgccacccgaagacggagatctataa
DBGET
integrated database retrieval system
